RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 REG1BP48304 166 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CDK5Q00535 292 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SCN1BQ07699 218 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IL18R1Q13478 541 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HES1Q14469 280 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HLA-DRB5Q30154 266 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SLC35D3Q5M8T2 416 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 FAM53AQ6NSI3 398 aaPredicted RBP4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 KCTD18Q6PI47 426 aaPredicted RBP4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CD300LDQ6UXZ3 194 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 KRT74Q7RTS7 529 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 EGFL6Q8IUX8 553 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PRSS35Q8N3Z0 413 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DRAM1Q8N682 238 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 C5orf56Q8N8D9 126 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 YIPF7Q8N8F6 280 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR10AC1Q8NH08 325 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CANT1Q8WVQ1 401 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TOMM40LQ969M1 308 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ADAT3Q96EY9 351 aaPredicted RBP4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 COQ2Q96H96 371 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RBM14Q96PK6 669 aaKnown RBP4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IL4I1Q96RQ9 567 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 KRTAP17-1Q9BYP8 105 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PKIBQ9C010 78 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CHST5Q9GZS9 411 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MOB1AQ9H8S9 216 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SLC25A19Q9HC21 320 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DPM3Q9P2X0 92 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SLC7A11Q9UPY5 501 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MOB4Q9Y3A3 225 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HSPE1-MOB4S4R3N1 261 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SORL1Q92673 2214 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TRGV10A0A0A0MS01 117 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TRBV2A0A0J9YWF9 115 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PPI3 338 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PQL4 384 aaPredicted RBP4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ODAMA1E959 279 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ARRDC5A6NEK1 342 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SERPINE3A8MV23 424 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 B2RBV5 119 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 BUB1B-PAK6H3BSN5 160 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GNGT2O14610 69 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SYT7O43581 403 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LY86O95711 162 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGKV1D-33P01593 117 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGKV1-33P01594 117 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGLV1-47P01700 117 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ATP6V1B1P15313 513 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF44P15621 663 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CCL1P22362 96 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LMO1P25800 156 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PEX2P28328 305 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SSTR5P35346 364 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ECI1P42126 302 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PTGFRP43088 359 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DGCR2P98153 550 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 BDH1Q02338 343 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TP53I3Q53FA7 332 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZFAND6Q6FIF0 208 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OVCH2Q7RTZ1 564 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CATSPERDQ86XM0 798 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 FAM58AQ8N1B3 248 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TCEANCQ8N8B7 351 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR10H4Q8NGA5 316 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR51D1Q8NGF3 324 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR51A4Q8NGJ6 313 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR13C9Q8NGT0 318 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ASB17Q8WXJ9 295 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 STMN2Q93045 179 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 BORCS8Q96FH0 119 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CYYR1Q96J86 154 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 AKR1E2Q96JD6 320 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SNX22Q96L94 193 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LRGUKQ96M69 825 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 P2RX4Q99571 388 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF556Q9HAH1 456 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NEK6Q9HC98 313 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 EXOSC4Q9NPD3 245 aaKnown RBP4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PAPOLBQ9NRJ5 636 aaKnown RBP4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 UBE2J1Q9Y385 318 aaPredicted RBP4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 FRAS1Q86XX4 4008 aa4.72□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ACOD1A6NK06 481 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 LEUTXA8MZ59 168 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SEC14L6B5MCN3 397 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF670-ZNF695F2Z2N8 137 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 LY6LH3BQJ8 138 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CCL24O00175 119 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MGST3O14880 152 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF254O75437 659 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GATBO75879 557 aaKnown RBP4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DUS4LO95620 317 aaKnown RBP4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HMGN1P05114 100 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KRT8P05787 483 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TMEM11P17152 192 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 BRS3P32247 399 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DAPP51397 102 aa4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MEF2CQ06413 473 aaPredicted RBP4.71□□□□□ -1.66
HLA-DPA3-207ENST00000454398 BNIP1Q12981 228 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms