RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FBN2P35556 2912 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 PTPN13Q12923 2485 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 TRAV24A0A0B4J272 114 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 OOEPA6NGQ2 149 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 OR2AT4A6NND4 320 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 OR2H2O95918 312 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 HAND1O96004 215 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 F12P00748 615 aaPredicted RBP16.15■□□□□ 0.18
RPS28-202ENST00000449223 PSG2P11465 335 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 COL8A1P27658 744 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 DUSP1P28562 367 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 PRSS3P35030 304 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 MICBQ29980 383 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 SHEQ5VZ18 495 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 STUMQ69YW2 141 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 RTN4RL2Q86UN3 420 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 YIPF5Q969M3 257 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 ZMAT3Q9HA38 289 aaKnown RBP16.15■□□□□ 0.18
RPS28-202ENST00000449223 DCAF16Q9NXF7 216 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 TREM2Q9NZC2 230 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 AKAP6Q13023 2319 aa16.15■□□□□ 0.18
RPS28-202ENST00000449223 FASNP49327 2511 aaKnown RBP16.15■□□□□ 0.18
RPS28-202ENST00000449223 IGKV1D-17A0A075B6S4 117 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 RFPL4AA6NLU0 287 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 RFPL4AL1F8VTS6 287 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 LGALS8O00214 317 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 SLC33A1O00400 549 aaPredicted RBP16.14■□□□□ 0.18
RPS28-202ENST00000449223 DEGS1O15121 323 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 UPK1BO75841 260 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 LPLP06858 475 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 CSF3P09919 207 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 EFNA4P52798 201 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 SNU13P55769 128 aaKnown RBP16.14■□□□□ 0.18
RPS28-202ENST00000449223 SSBP1Q04837 148 aaKnown RBP16.14■□□□□ 0.18
RPS28-202ENST00000449223 DCTN2Q13561 401 aaKnown RBP16.14■□□□□ 0.18
RPS28-202ENST00000449223 BAK1Q16611 211 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 ANGPTL6Q8NI99 470 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 DNTTIP1Q9H147 329 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 CXorf56Q9H5V9 222 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 DNAJB11Q9UBS4 358 aa16.14■□□□□ 0.18
RPS28-202ENST00000449223 TRAV38-1A0A0B4J264 116 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 MEIOCA2RUB1 952 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 PTHLHP12272 177 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 IL7P13232 177 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 ZNF44P15621 663 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 PAX1P15863 534 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 CD80P33681 288 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 RBMXP38159 391 aaKnown RBP16.14■□□□□ 0.17
RPS28-202ENST00000449223 CDKN1AP38936 164 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 GMFBP60983 142 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 DGCR2P98153 550 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 PAX5Q02548 391 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 PDCD1Q15116 288 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 NKAPLQ5M9Q1 402 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 ATPAF1Q5TC12 328 aaPredicted RBP16.14■□□□□ 0.17
RPS28-202ENST00000449223 SUMF2Q8NBJ7 301 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 OR52I2Q8NH67 350 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 FCAMRQ8WWV6 532 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 CCL19Q99731 98 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 SULT4A1Q9BR01 284 aa16.14■□□□□ 0.17
RPS28-202ENST00000449223 ZNF701Q9NV72 531 aaPredicted RBP16.14■□□□□ 0.17
RPS28-202ENST00000449223 USF3Q68DE3 2245 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 PPIAL4EA0A075B759 164 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 PPIAL4DF5H284 164 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 PPIAL4FP0DN26 164 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 DAOP14920 347 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 COL8A2P25067 703 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 PRDX2P32119 198 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 RBM39Q14498 530 aaKnown RBP16.13■□□□□ 0.17
RPS28-202ENST00000449223 FAM201AQ5SY85 155 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 ATAD3CQ5T2N8 411 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 OLFML2AQ68BL7 652 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 GCDHQ92947 438 aaPredicted RBP16.13■□□□□ 0.17
RPS28-202ENST00000449223 SDSLQ96GA7 329 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 THAP7Q9BT49 309 aaPredicted RBP16.13■□□□□ 0.17
RPS28-202ENST00000449223 DPCDQ9BVM2 203 aaPredicted RBP16.13■□□□□ 0.17
RPS28-202ENST00000449223 MTFP1Q9UDX5 166 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 OR14J1Q9UGF5 321 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 ELF5Q9UKW6 265 aaPredicted RBP16.13■□□□□ 0.17
RPS28-202ENST00000449223 ANAPC10Q9UM13 185 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 PPIAL4AQ9Y536 164 aa16.13■□□□□ 0.17
RPS28-202ENST00000449223 POM121CA8CG34 1229 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 MCRIP1C9JLW8 97 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 TNFRSF13BO14836 293 aaPredicted RBP16.12■□□□□ 0.17
RPS28-202ENST00000449223 SSX5O60225 188 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 ZNF737O75373 536 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 CSN2P05814 226 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 KCNJ3P48549 501 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 GAPTQ8N292 157 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 CD177Q8N6Q3 437 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 FAAP24Q9BTP7 215 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 CHODLQ9H9P2 273 aa16.12■□□□□ 0.17
RPS28-202ENST00000449223 AMY2BP19961 511 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 MDH2P40926 338 aaKnown RBP16.11■□□□□ 0.17
RPS28-202ENST00000449223 CBX5P45973 191 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 GNG2P59768 71 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 BTG1P62324 171 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 IFITM3Q01628 133 aa16.11■□□□□ 0.17
RPS28-202ENST00000449223 SFRP4Q6FHJ7 346 aaPredicted RBP16.11■□□□□ 0.17
RPS28-202ENST00000449223 ZNF788Q6ZQV5 615 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms