RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TRBV9A0A0B4J1U6 114 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 TRGC2P03986 189 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 P2RY2P41231 377 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 PSG5Q15238 335 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 TCEAL8Q8IYN2 117 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 PHOSPHO2Q8TCD6 241 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 LINC00470Q9BZP3 86 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 MBNL1Q9NR56 388 aaKnown RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 AGLP35573 1532 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 CFHP08603 1231 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 HOXD3P31249 432 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 OR52E1Q8NGJ3 308 aa8.02□□□□□ -1.13
NIPBL-202ENST00000448238 COA3Q9Y2R0 106 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-202ENST00000448238 ZBTB42B2RXF5 422 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 SMAD6O43541 496 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ERGP11308 486 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 SMN1Q16637 294 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 Q7L0L9 218 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 FLYWCH2Q96CP2 140 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 RNF225M0QZC1 329 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 CD38P28907 300 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 CEACAM6P40199 344 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 DLX6P56179 175 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 DGCR2P98153 550 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 OLIG2Q13516 323 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 SYPL1Q16563 259 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 TAS1R1Q7RTX1 841 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 PTOV1Q86YD1 416 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 LYG1Q8N1E2 194 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ARIH2OSQ8N7S6 290 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 OR4P4Q8NGL7 312 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 HSPB9Q9BQS6 159 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 UNC13AQ9UPW8 1703 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 PCNX1Q96RV3 2341 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ROBO2Q9HCK4 1378 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM50AO95807 157 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 GABRA1P14867 456 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 SLC37A1P57057 533 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 SYT14P1Q58G82 188 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 MRPL54Q6P161 138 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 TP53I13Q8NBR0 393 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 NXT2Q9NPJ8 142 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 C20orf141Q9NUB4 165 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 PRKNO60260 465 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 FGF5P12034 268 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 FCGR2BP31994 310 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 C1orf185Q5T7R7 199 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 C10orf113Q5VZT2 155 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 RTL10Q7L3V2 364 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 GDF7Q7Z4P5 450 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 OR8D4Q8NGM9 314 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 A4GNTQ9UNA3 340 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF98A6NK75 572 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 GGTLC3B5MD39 225 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 H7C1H1 209 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 M0R1B8 84 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 C20orf196Q8IYI0 205 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 OR51E1Q8TCB6 317 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 CYSLTR2Q9NS75 346 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 TREM2Q9NZC2 230 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 HRO43593 1189 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 HIST1H1DP16402 221 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 HIST1H1AQ02539 215 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 S1PR5Q9H228 398 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 COA4Q9NYJ1 87 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 C10orf71Q711Q0 1435 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 PRSS38A1L453 326 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 G3V2L1 256 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 TSPAN12O95859 305 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 LGALS1P09382 135 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 RPL32P62910 135 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 FUT2Q10981 343 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ELAVL1Q15717 326 aaKnown RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 GAGE2EQ4V326 116 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 ADGRA1Q86SQ6 560 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 PQLC3Q8N755 202 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 OR1L8Q8NGR8 309 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 KISS1RQ969F8 398 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-202ENST00000448238 GAGE2DQ9UEU5 116 aa8.01□□□□□ -1.13
NIPBL-202ENST00000448238 RNF165Q6ZSG1 346 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 ANKRD33Q7Z3H0 272 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 MRPL52Q86TS9 123 aaKnown RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 RBM45Q8IUH3 476 aaKnown RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 OR5M9Q8NGP3 310 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TXNRD2Q9NNW7 524 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 CNOT1A5YKK6 2376 aaKnown RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 ALG14Q96F25 216 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 OR8B2Q96RD0 313 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 DHCR7Q9UBM7 475 aaKnown RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 HDGFL3Q9Y3E1 203 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 MBLAC1A4D2B0 266 aaPredicted RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 SLC17A2O00624 439 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 PLAUP00749 431 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 CRPP02741 224 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 FUCA1P04066 466 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 CTSSP25774 331 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms