RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 DUSP21Q9H596 190 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 EXOSC4Q9NPD3 245 aaKnown RBP12.15□□□□□ -0.46
HDAC4-204ENST00000446876 TMEM138Q9NPI0 162 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 TNFRSF19Q9NS68 423 aa12.15□□□□□ -0.46
HDAC4-204ENST00000446876 PIN1P1O15428 100 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 HOXA3O43365 443 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-204ENST00000446876 CDRT1O95170 752 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF44P15621 663 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 MAP2K4P45985 399 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 OR3A1P47881 315 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 ACTG1P63261 375 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 BLMHQ13867 455 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 SPHARQ15513 63 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 SLC9A3R2Q15599 337 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 HCP5Q6MZN7 132 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 METAP1DQ6UB28 335 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-204ENST00000446876 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 NR1H4Q96RI1 486 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF184Q99676 751 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-204ENST00000446876 CCDC90BQ9GZT6 254 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 METTL8Q9H825 291 aaKnown RBP12.14□□□□□ -0.47
HDAC4-204ENST00000446876 RAB26Q9ULW5 256 aa12.14□□□□□ -0.47
HDAC4-204ENST00000446876 RRP15Q9Y3B9 282 aaKnown RBP12.14□□□□□ -0.47
HDAC4-204ENST00000446876 SH2D1BO14796 132 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 MAS1P04201 325 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ALDOBP05062 364 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 CD1AP06126 327 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 FSTP19883 344 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 PRTN3P24158 256 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-204ENST00000446876 TGFBR2P37173 567 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 DLX6P56179 175 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 BPIFB3P59826 476 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 BDH1Q02338 343 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ACSM1Q08AH1 577 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 RSU1Q15404 277 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 FAM27D1Q5T7N8 215 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 Q6P435 159 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF782Q6ZMW2 699 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-204ENST00000446876 C1orf122Q6ZSJ8 110 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ZFAND2BQ8WV99 257 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 TAF15Q92804 592 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDAC4-204ENST00000446876 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-204ENST00000446876 TMED9Q9BVK6 235 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 PPA2Q9H2U2 334 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-204ENST00000446876 NOX4Q9NPH5 578 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 CKLFQ9UBR5 152 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 KIAA2026Q5HYC2 2103 aa12.13□□□□□ -0.47
HDAC4-204ENST00000446876 HSPB6O14558 160 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 NPFFO15130 113 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 GPX5O75715 221 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 HTR3BO95264 441 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 MELTFP08582 738 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 HSMCR30P0CW71 290 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 COX7A1P24310 79 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 PTGFRP43088 359 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 MTNR1BP49286 362 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 GUCA2AQ02747 115 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 LIPKQ5VXJ0 399 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 NCR3LG1Q68D85 454 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 Q6YL49 198 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 C17orf50Q8WW18 174 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 PRDM13Q9H4Q3 707 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 UNKLQ9H9P5 680 aaKnown RBP12.12□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF581Q9P0T4 197 aa12.12□□□□□ -0.47
HDAC4-204ENST00000446876 A0A0G2JK05 382 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 A0A1W2PP11 408 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 A0A1W2PPH5 198 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 MEIOCA2RUB1 952 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-204ENST00000446876 MGST3O14880 152 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 DEGS1O15121 323 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 SERPINA2P20848 420 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 EEF1B2P24534 225 aaKnown RBP12.11□□□□□ -0.47
HDAC4-204ENST00000446876 SAA4P35542 130 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 BMXP51813 675 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-204ENST00000446876 ACSM3Q53FZ2 586 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 RBM48Q5RL73 367 aaKnown RBP12.11□□□□□ -0.47
HDAC4-204ENST00000446876 ELP2Q6IA86 826 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 PRSS48Q7RTY5 328 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 JAGN1Q8N5M9 183 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 MUL1Q969V5 352 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 RHOFQ9HBH0 211 aa12.11□□□□□ -0.47
HDAC4-204ENST00000446876 C17orf98A8MV24 154 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
HDAC4-204ENST00000446876 ZNF728P0DKX0 622 aa12.1□□□□□ -0.47
HDAC4-204ENST00000446876 LMO1P25800 156 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms