RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PCBD1P61457 104 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 HERV-K104P61576 105 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 ZNF92Q03936 586 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 CEACAM16Q2WEN9 425 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 KRTAP27-1Q3LI81 207 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 C15orf54Q8N8G6 183 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 ZNF442Q9H7R0 627 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 TMED3Q9Y3Q3 217 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 WRBO00258 174 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 CXCL13O43927 109 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 PAX6P26367 422 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 RGS19P49795 217 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 RAB5BP61020 215 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 GUK1Q16774 197 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 OR11L1Q8NGX0 322 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 PAPOLGQ9BWT3 736 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 OR2H1Q9GZK4 316 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 EIF5A2Q9GZV4 153 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 RPS10P5Q9NQ39 176 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 PILRBQ9UKJ0 227 aa14.28□□□□□ -0.12
SEMA3B-207ENST00000441915 ST8SIA5O15466 376 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 PRH1P02810 166 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 FOLR3P41439 243 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 PDCD1Q15116 288 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 OR8B8Q15620 311 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 TMEM211Q6ICI0 200 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 GGNQ86UU5 652 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 TECTBQ96PL2 329 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 RNF122Q9H9V4 155 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 WFDC1Q9HC57 220 aa14.27□□□□□ -0.12
SEMA3B-207ENST00000441915 ZNF816-ZNF321PA0A0X1KG74 233 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 OR7C1O76099 320 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 CBR1P16152 277 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 RAB5CP51148 216 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 RBM11P57052 281 aaKnown RBP14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 GNMTQ14749 295 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 ETV3LQ6ZN32 361 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 C14orf79Q96F83 325 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 WNT5BQ9H1J7 359 aa14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-207ENST00000441915 C5orf52A6NGY3 159 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 FOLR2P14207 255 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 BTF3P20290 206 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 FUT3P21217 361 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 NHLH2Q02577 135 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 HABP2Q14520 560 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 RIPPLY2Q5TAB7 128 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 PMS2CLQ68D20 193 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 CLCC1Q96S66 551 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 RSRP1Q9BUV0 290 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 A0A0G2JMM0 328 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 A0A1W2PPB8 328 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 A0A1W2PRS3 328 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 KIR3DP1A8MWS1 328 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 UBE2CO00762 179 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 CFIP05156 583 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 AADACP22760 399 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 FHITP49789 147 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 UCP2P55851 309 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 TRA2AQ13595 282 aaKnown RBP eCLIP14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 MEX3BQ6ZN04 569 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 SLC35G3Q8N808 338 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 OR10D3Q8NH80 312 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 FGFBP3Q8TAT2 258 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 C19orf12Q9NSK7 152 aa14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 STRAPQ9Y3F4 350 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-207ENST00000441915 PPYP01298 95 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 ZNF611Q8N823 705 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 HSD17B11Q8NBQ5 300 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 TCEAL7Q9BRU2 100 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 ZDHHC8Q9ULC8 765 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 RCL1Q9Y2P8 373 aaKnown RBP14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 DMDP11532 3685 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 TRAPPC6AO75865 159 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 AKR1C3P42330 323 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 CALHM1Q8IU99 346 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 OR2V1Q8NHB1 315 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 TP53RKQ96S44 253 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 EGLN1Q9GZT9 426 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 PARPBPQ9NWS1 579 aa14.25□□□□□ -0.13
SEMA3B-207ENST00000441915 C3orf85A0A1B0GTC6 90 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 FBP1P09467 338 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 SELLP14151 372 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 PMELP40967 661 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 SRPXP78539 464 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 AWAT1Q58HT5 328 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 ABLIM2Q6H8Q1 611 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 SLC25A26Q70HW3 274 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 OR4D5Q8NGN0 318 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 SH3BGRL3Q9H299 93 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 GPR35Q9HC97 309 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 P4HTMQ9NXG6 502 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 FRYLO94915 3013 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 NTN3O00634 580 aaPredicted RBP14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 MPPED1O15442 326 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 C1QL1O75973 258 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 RFPL3SP0C7P2 107 aa14.24□□□□□ -0.13
SEMA3B-207ENST00000441915 RNF212Q495C1 297 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms