RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 GALNT14Q96FL9 552 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 LINC00477Q96M19 166 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 C1QTNF6Q9BXI9 259 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 OR2J1Q9GZK6 312 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF703Q9H7S9 590 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM45AQ9NWC5 275 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 TP53TG1Q9Y2A0 90 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 LAMTOR2Q9Y2Q5 125 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 DNAH14Q0VDD8 3507 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 IQCMA0A1B0GVH7 501 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 UPK1AO00322 258 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 DVL1O14640 695 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 IL18BPO95998 194 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 CATP04040 527 aaKnown RBP9.05□□□□□ -0.96
SYNE2-206ENST00000441438 APODP05090 189 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 PGFP49763 221 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 DVL1P1P54792 670 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-206ENST00000441438 PAFAH1B3Q15102 231 aaKnown RBP9.05□□□□□ -0.96
SYNE2-206ENST00000441438 HLA-DRB5Q30154 266 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 SLC25A52Q3SY17 297 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 MOB3BQ86TA1 216 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 IQCF1Q8N6M8 205 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 GPR146Q96CH1 333 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
SYNE2-206ENST00000441438 ANKRD20A5PA0PJZ0 165 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 KNG1P01042 644 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 OPN1SWP03999 348 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 PSMB1P20618 241 aaKnown RBP9.04□□□□□ -0.96
SYNE2-206ENST00000441438 SGSHP51688 502 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 S100A10P60903 97 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 MORN2Q502X0 79 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 OR5B3Q8NH48 314 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 LRRC58Q96CX6 371 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF300Q96RE9 604 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-206ENST00000441438 NDC1Q9BTX1 674 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 FAM206AQ9NX38 181 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 MYO7AQ13402 2215 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 PIRO00625 290 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 VCYO14598 125 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 GALR3O60755 368 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-206ENST00000441438 EPCAMP16422 314 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 SDC1P18827 310 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 CLDN15P56746 228 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 FMODQ06828 376 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 IZUMO1Q8IYV9 350 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 SDSLQ96GA7 329 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 CDX2Q99626 313 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-206ENST00000441438 DOHHQ9BU89 302 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 SLIRPQ9GZT3 109 aaKnown RBP9.04□□□□□ -0.96
SYNE2-206ENST00000441438 POMKQ9H5K3 350 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 RNF167Q9H6Y7 350 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 TRAPPC4Q9Y296 219 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 CEP290O15078 2479 aa9.04□□□□□ -0.96
SYNE2-206ENST00000441438 MFNGO00587 321 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 C1orf105O95561 183 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 ACP2P11117 423 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 PRTN3P24158 256 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 CHATP28329 748 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 ZFP36L2P47974 494 aaKnown RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 RPL34P49207 117 aaKnown RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 C2orf68Q2NKX9 166 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 IER5LQ5T953 404 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 TBPL2Q6SJ96 375 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 GCSAMQ8N6F7 178 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 OR11H4Q8NGC9 324 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 FGGYQ96C11 551 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 MRPS24Q96EL2 167 aaKnown RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 POPDC3Q9HBV1 291 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 TAS2R16Q9NYV7 291 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 LSM7Q9UK45 103 aaKnown RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 RPL36A-HNRNPH2H7BZ11 118 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 USF1P22415 310 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 ARG2P78540 354 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 CA13Q8N1Q1 262 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 SVBPQ8N300 66 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 PNKDQ8N490 385 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 KCTD14Q9BQ13 255 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 NRIP2Q9BQI9 281 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 ADAT1Q9BUB4 502 aaKnown RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 SDR39U1Q9NRG7 319 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 SLC2A6Q9UGQ3 507 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 TRAPPC2LQ9UL33 140 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 RNASET2O00584 256 aaKnown RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 MSTNO14793 375 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 PFN3P60673 137 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 MFAP5Q13361 173 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF284Q2VY69 593 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 TECRLQ5HYJ1 363 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM69Q5SWH9 247 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 HIST2H3PS2Q5TEC6 136 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF419Q96HQ0 510 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-206ENST00000441438 DIRAS2Q96HU8 199 aa9.03□□□□□ -0.96
SYNE2-206ENST00000441438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 A0A0G2JLM5 398 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
SYNE2-206ENST00000441438 OR7C1O76099 320 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms