RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 WASF3Q9UPY6 502 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 WSB1Q9Y6I7 421 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 A0A087WZY1 265 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 MS4A18H0YCH9 400 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 MPLP40238 635 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 MS4A18Q3C1V0 323 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 C9orf40Q8IXQ3 194 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 C1orf87Q8N0U7 546 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 PLPP5Q8NEB5 264 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 LOXL4Q96JB6 756 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 ABHD14AQ9BUJ0 271 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 ACTR3CQ9C0K3 210 aaPredicted RBP10.37□□□□□ -0.75
LTBR-203ENST00000441074 NAA60Q9H7X0 242 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 AKIRIN1Q9H9L7 192 aaPredicted RBP10.37□□□□□ -0.75
LTBR-203ENST00000441074 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 LIPGQ9Y5X9 500 aa10.37□□□□□ -0.75
LTBR-203ENST00000441074 ASCC3Q8N3C0 2202 aaKnown RBP10.37□□□□□ -0.75
LTBR-203ENST00000441074 CCDC187A0A096LP49 1063 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 IGHV3-20A0A0C4DH32 117 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 CDRT15L2A8MXV6 281 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 QDPRP09417 244 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 GZMBP10144 247 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ATP6V0CP27449 155 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ALDH3B1P43353 468 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 RND2P52198 227 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 PIGPP57054 158 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 HLA-DRB3P79483 266 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ZNF266Q14584 549 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 FBXW12Q6X9E4 464 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 WDFY1Q8IWB7 410 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ZNF501Q96CX3 271 aaPredicted RBP10.36□□□□□ -0.75
LTBR-203ENST00000441074 C18orf12Q96KH6 178 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ZNF701Q9NV72 531 aaPredicted RBP10.36□□□□□ -0.75
LTBR-203ENST00000441074 HSF4Q9ULV5 492 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 RCL1Q9Y2P8 373 aaKnown RBP10.36□□□□□ -0.75
LTBR-203ENST00000441074 TNRC6BQ9UPQ9 1833 aaKnown RBP10.36□□□□□ -0.75
LTBR-203ENST00000441074 FAM230AA0A1W2PPH8 454 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 DHRS7CA6NNS2 312 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 OR5AC1P0C628 307 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 CASP6P55212 293 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 RNF4P78317 190 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
LTBR-203ENST00000441074 SP6Q3SY56 376 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ABHD12BQ7Z5M8 362 aaPredicted RBP10.36□□□□□ -0.75
LTBR-203ENST00000441074 COMMD2Q86X83 199 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 TMEM183AQ8IXX5 376 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ZFP62Q8NB50 900 aaPredicted RBP10.36□□□□□ -0.75
LTBR-203ENST00000441074 OR10G4Q8NGN3 311 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 OR6C1Q96RD1 312 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 TM2D1Q9BX74 207 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 AK3Q9UIJ7 227 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 LOC400499M0QZD8 3231 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 ARID1AO14497 2285 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 RALGAPA1Q6GYQ0 2036 aa10.36□□□□□ -0.75
LTBR-203ENST00000441074 IGHV5-10-1A0A0J9YXX1 117 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 SNRPCP09234 159 aaKnown RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 PGA5P0DJD9 388 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 ZNF17P17021 662 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 ZNF43P17038 809 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 IL11P20809 199 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 SFTPDP35247 375 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 EIF3IQ13347 325 aaKnown RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 GNMTQ14749 295 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 PEAR1Q5VY43 1037 aaPredicted RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 WDR74Q6RFH5 385 aaPredicted RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 LIAT1Q6ZQX7 453 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 LANCL3Q6ZV70 420 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 C5orf24Q7Z6I8 188 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 FBXL14Q8N1E6 418 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 OR52M1Q8NGK5 317 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 OR1N1Q8NGS0 311 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 OR14L1PQ8NHC6 308 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 ST8SIA1Q92185 356 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 BOD1Q96IK1 185 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 ZNF700Q9H0M5 742 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 GPR84Q9NQS5 396 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 DKKL1Q9UK85 242 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 PTPRZ1P23471 2315 aaPredicted RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 ZFHX4Q86UP3 3567 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 IGKV1-9A0A0C4DH69 117 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 CLDN34H7C241 214 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 COX5BP10606 129 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 CCL1P22362 96 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 H3F3AP84243 136 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 NHLH1Q02575 133 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 NSDHLQ15738 373 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 H1FNTQ75WM6 255 aaPredicted RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 C1QL2Q7Z5L3 287 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 ZNF441Q8N8Z8 693 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 OR8B12Q8NGG6 310 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 RTN4IP1Q8WWV3 396 aaPredicted RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 RELTQ969Z4 430 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 RBMXL1Q96E39 390 aaKnown RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 FAM71F1Q96KD3 344 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms