RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZNF14P17017 642 aaPredicted RBP12.28□□□□□ -0.44
LIMD1-202ENST00000440097 AGAP20933 346 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 MPZP25189 248 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 NUBP1P53384 320 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 QRFPP83859 136 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 RAB3CQ96E17 227 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 TCEAL7Q9BRU2 100 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 PRR13Q9NZ81 148 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 METTL1Q9UBP6 276 aaKnown RBP12.28□□□□□ -0.44
LIMD1-202ENST00000440097 V9GYS6 101 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 A6NLC8 198 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 TMEM14DPA8MWL7 114 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 CLN5O75503 358 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 ADAP1O75689 374 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 SCGNO76038 276 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 HLA-HP01893 362 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 SPINK2P20155 84 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 ACKR3P25106 362 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 ID4P47928 161 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 MTCP1P56278 107 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 RNFT1Q5M7Z0 435 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 OR51T1Q8NGJ9 327 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.44
LIMD1-202ENST00000440097 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.44
LIMD1-202ENST00000440097 NBASA2RRP1 2371 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 ANKRD11Q6UB99 2663 aaPredicted RBP12.27□□□□□ -0.45
LIMD1-202ENST00000440097 MFNGO00587 321 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 SOCS1O15524 211 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 HTR3BO95264 441 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 IGLV3-1P01715 115 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 PMP2P02689 132 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 IFNA6P05013 189 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 FCGR3AP08637 254 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 CCL2P13500 99 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 TNFSF10P50591 281 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 FOXG1P55316 489 aaPredicted RBP12.27□□□□□ -0.45
LIMD1-202ENST00000440097 CYCSP99999 105 aaKnown RBP12.27□□□□□ -0.45
LIMD1-202ENST00000440097 RNF212Q495C1 297 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 C1QL2Q7Z5L3 287 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.45
LIMD1-202ENST00000440097 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 MT-ND4LP03901 98 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 TMEM225BP0DP42 221 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 NQO2P16083 231 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 WT1P19544 449 aaPredicted RBP12.26□□□□□ -0.45
LIMD1-202ENST00000440097 RNPS1Q15287 305 aaKnown RBP12.26□□□□□ -0.45
LIMD1-202ENST00000440097 KRBOX4Q5JUW0 171 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 ISOC2Q96AB3 205 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 KIRREL1Q96J84 757 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 SPTA1P02549 2419 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 GATCO43716 136 aaKnown RBP12.26□□□□□ -0.45
LIMD1-202ENST00000440097 FBXO24O75426 580 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 RD3LP0DJH9 198 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 ARFRP1Q13795 201 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 SLC9A3R2Q15599 337 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 DEFB109BQ30KR1 87 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 RPL7L1Q6DKI1 246 aaKnown RBP12.26□□□□□ -0.45
LIMD1-202ENST00000440097 PRSS54Q6PEW0 395 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 OR51F2Q8NH61 342 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 SECTM1Q8WVN6 248 aa12.26□□□□□ -0.45
LIMD1-202ENST00000440097 A0A1W2PPH5 198 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 CHRM2P08172 466 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 SNRNP70P08621 437 aaKnown RBP12.25□□□□□ -0.45
LIMD1-202ENST00000440097 BTNL8Q6UX41 500 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 NUFIP2Q7Z417 695 aaKnown RBP12.25□□□□□ -0.45
LIMD1-202ENST00000440097 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
LIMD1-202ENST00000440097 OR56B1Q8NGI3 324 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 PAPOLGQ9BWT3 736 aaKnown RBP12.25□□□□□ -0.45
LIMD1-202ENST00000440097 SLC5A7Q9GZV3 580 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 IGHV2-5P01817 119 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 PRF1P14222 555 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 SOX8P57073 446 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 P4HA3Q7Z4N8 544 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 AQP10Q96PS8 301 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 BCO1Q9HAY6 547 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 TAF9BQ9HBM6 251 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 SPRR3Q9UBC9 169 aa12.25□□□□□ -0.45
LIMD1-202ENST00000440097 A0A0A6YYD4 124 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 hCG_1809904A0A1W2PP81 198 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 A0A1W2PR64 198 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 A0A1W2PRV1 198 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 FBP1P09467 338 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 DAOP14920 347 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 ZNF92Q03936 586 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 ARHGAP5-AS1Q96IT6 56 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 C1orf147Q96MC9 270 aaPredicted RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 LINC00470Q9BZP3 86 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 ANGPTL7O43827 346 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 CSTBP04080 98 aaKnown RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 MMP7P09237 267 aaPredicted RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 OR8U9P0C7N5 309 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 GABRR1P24046 479 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 EIF2S3P41091 472 aaKnown RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 DVL1P1P54792 670 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms