RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 APH1AQ96BI3 265 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 GMPPAQ96IJ6 420 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ADGRG7Q96K78 797 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 LURAP1Q96LR2 239 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ARL6Q9H0F7 186 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR10A2Q9H208 303 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 PIGMQ9H3S5 423 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SEC61A2Q9H9S3 476 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 RHOFQ9HBH0 211 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SLC7A10Q9NS82 523 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CENPMQ9NSP4 180 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 RDH8Q9NYR8 311 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CGGBP1Q9UFW8 167 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 POLR1DQ9Y2S0 133 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 IGKV1D-43A0A0B4J1Z2 117 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 IGHV3-64DA0A0J9YX35 117 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ARPC5O15511 151 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 FGF16O43320 207 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 DHHO43323 396 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 SSX5O60225 188 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 MPZL1O95297 269 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 HOXD4P09016 255 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 COX5BP10606 129 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CD79AP11912 226 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 FCGR2AP12318 317 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PTGER4P35408 488 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 NUP62P37198 522 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 RPS27P42677 84 aaKnown RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 IL13RA1P78552 427 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ENDOGQ14249 297 aaKnown RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ABLIM2Q6H8Q1 611 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 EIF5AL1Q6IS14 154 aaKnown RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 LINC00346Q8IVM7 164 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 WDFY1Q8IWB7 410 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ZSCAN4Q8NAM6 433 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 INO80EQ8NBZ0 244 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 SLC30A7Q8NEW0 376 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PXT1Q8NFP0 134 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OR4K15Q8NH41 348 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 NABP1Q96AH0 204 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 GAL3ST1Q99999 423 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ARPC5LQ9BPX5 153 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 LINC00470Q9BZP3 86 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CHIAQ9BZP6 476 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 SHARPINQ9H0F6 387 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OPA3Q9H6K4 179 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CRLF2Q9HC73 371 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF224Q9NZL3 707 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 VSIG4Q9Y279 399 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 NOP16Q9Y3C1 178 aaKnown RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 KLF2Q9Y5W3 355 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 POMT1Q9Y6A1 747 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 FXYD6-FXYD2A0A087WZ82 144 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM235A6NFC5 223 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 A6NNC1 897 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 MPTX1A8MV57 137 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ABCD4O14678 606 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 MSTNO14793 375 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CFDP00746 253 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CRHP06850 196 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 B4GALT1P15291 398 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CRYGSP22914 178 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 IGHV1-2P23083 117 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PSMB6P28072 239 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 SSTR2P30874 369 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 HOXC12P31275 282 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PTGFRP43088 359 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PRKXP51817 358 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 UCP3P55916 312 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PRSS12P56730 875 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 BSPH1Q075Z2 132 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PAN3Q58A45 887 aaKnown RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 FAM209AQ5JX71 171 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM42Q69YG0 159 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 FAAP20Q6NZ36 180 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PRSS54Q6PEW0 395 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 CORO6Q6QEF8 472 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 GLIPR1L1Q6UWM5 242 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 LHFPL2Q6ZUX7 228 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ABHD12BQ7Z5M8 362 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 SAXO1Q8IYX7 474 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF283Q8N7M2 679 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 Q8NFD4 153 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OR52B4Q8NGK2 314 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OR5H2Q8NGV7 314 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OR1S1Q8NH92 325 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 LHFPL5Q8TAF8 219 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 OR51E1Q8TCB6 317 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 SAT2Q96F10 170 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-203ENST00000439962 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 AQP10Q96PS8 301 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 FXYD6Q9H0Q3 95 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 GPR84Q9NQS5 396 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM100Q9NV29 134 aa4.09□□□□□ -1.75
EDEM3-203ENST00000439962 STAB1Q9NY15 2570 aa4.09□□□□□ -1.76
EDEM3-203ENST00000439962 XRCC2O43543 280 aa4.08□□□□□ -1.76
EDEM3-203ENST00000439962 HLA-HP01893 362 aa4.08□□□□□ -1.76
EDEM3-203ENST00000439962 CTSDP07339 412 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms