RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ADGRB2O60241 1585 aa1.96□□□□□ -2.1
TRAPPC13-204ENST00000438419 DIP2CQ9Y2E4 1556 aa1.96□□□□□ -2.1
TRAPPC13-204ENST00000438419 NUP205Q92621 2012 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CLTCQ00610 1675 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZC3H13Q5T200 1668 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 RREB1Q92766 1687 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ELP1O95163 1332 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 PLCH2O75038 1416 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 SCAPERQ9BY12 1400 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ATP7AQ04656 1500 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 DISP1Q96F81 1524 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 hCG_2039718K7EN88 272 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 TCAPO15273 167 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZMPSTE24O75844 475 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 NPPAP01160 153 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 RLN2P04090 185 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CDK1P06493 297 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 GIMD1P0DJR0 217 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 MPV17P39210 176 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 DNASE1L1P49184 302 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ACOT2P49753 483 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 GDI2P50395 445 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 RBX1P62877 108 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ATP5G2Q06055 141 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 TRDNQ13061 729 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 GUSBP1Q15486 140 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 SP6Q3SY56 376 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZNF678Q5SXM1 525 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 KPRPQ5T749 579 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 MORN3Q6PF18 240 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 UGT2A3Q6UWM9 527 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 FAM231DQ6ZW35 169 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 DAZ4Q86SG3 579 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CYP4Z2PQ8N1L4 340 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 RNF10Q8N5U6 811 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR52N1Q8NH53 320 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CPB2Q96IY4 423 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 QKIQ96PU8 341 aaKnown RBP eCLIP1.95□□□□□ -2.11e-6■■■■□ 26.5
TRAPPC13-204ENST00000438419 ZNF649Q9BS31 505 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 SHCBP1LQ9BZQ2 653 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 API5Q9BZZ5 524 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 PRORYQ9H606 182 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 WDR55Q9H6Y2 383 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 DAZ1Q9NQZ3 744 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 RBM22Q9NW64 420 aaKnown RBP eCLIP1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 RMND1Q9NWS8 449 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CHMP5Q9NZZ3 219 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CFAP45Q9UL16 551 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 ADAMTS7Q9UKP4 1686 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 CASZ1Q86V15 1759 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 SETD5Q9C0A6 1442 aa1.95□□□□□ -2.1
TRAPPC13-204ENST00000438419 FAM135AQ9P2D6 1515 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 SETXQ7Z333 2677 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 CICQ96RK0 1608 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 IGHV3OR16-8A0A075B7F1 116 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 CLDN34H7C241 214 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR2A4O95047 310 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 NRASP01111 189 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 HRASP01112 189 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 KRASP01116 189 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 TAC1P20366 129 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 MPIP34949 423 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 IDH2P48735 452 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 DSTNP60981 165 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 VSNL1P62760 191 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 PSG3Q16557 428 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 PRR9Q5T870 116 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 KCTD16Q68DU8 428 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 FAM131AQ6UXB0 335 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 SSX6Q7RTT6 188 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 LRRC8AQ8IWT6 810 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 SGPP2Q8IWX5 399 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 LINC00337Q8N6G1 96 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 FAM57AQ8TBR7 257 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 KLF14Q8TD94 323 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZNF396Q96N95 335 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 RILPQ96NA2 401 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 SPACA5Q96QH8 159 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR2A7Q96R45 310 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 C1orf50Q9BV19 199 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 TMBIM4Q9HC24 238 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 TREM1Q9NP99 234 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 SDHAF3Q9NRP4 125 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 NLE1Q9NVX2 485 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 IL37Q9NZH6 218 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 STX18Q9P2W9 335 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 DHCR7Q9UBM7 475 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 NXT1Q9UKK6 140 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 INSIG2Q9Y5U4 225 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 MAST1Q9Y2H9 1570 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 KDM5AP29375 1690 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 PIEZO1Q92508 2521 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 ABCA6Q8N139 1617 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 ABCC3O15438 1527 aa1.94□□□□□ -2.1
TRAPPC13-204ENST00000438419 TRANK1O15050 2925 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 REREQ9P2R6 1566 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 MAP3K5Q99683 1374 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 GOLGA8QA0A0J9YX86 632 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 C16orf90A8MZG2 172 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 HSBP1L1C9JCN9 74 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms