RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 ADAMTS17Q8TE56 1095 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 PCED1AQ9H1Q7 454 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 NTMQ9P121 344 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 OR5AL1P0C617 328 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 USF1P22415 310 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-206ENST00000438092 MRPS11P82912 194 aaKnown RBP9.13□□□□□ -0.95
SHPRH-206ENST00000438092 BAP18Q8IXM2 172 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 TMEM171Q8WVE6 324 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 YIPF6Q96EC8 236 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 LIMS3P0CW19 117 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 LIMS4P0CW20 117 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 RAB5AP20339 215 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 BRS3P32247 399 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 OPN3Q9H1Y3 402 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-206ENST00000438092 PRDM6Q9NQX0 595 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 HSPB2A8KAH6 182 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 TOX3O15405 576 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-206ENST00000438092 ADRA2AP08913 450 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 CD1BP29016 333 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 CCL8P80075 99 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 AESQ08117 197 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 HSPB2Q16082 182 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 ETFRF1Q6IPR1 90 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 ZNF429Q86V71 674 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 SSMEM1Q8WWF3 244 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 AMDHD2Q9Y303 409 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 CKAP5Q14008 2032 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 IGHV3OR16-10A0A075B7F0 116 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 IGHV3-72A0A0B4J1Y9 119 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 CGB1A6NKQ9 187 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 HSBP1O75506 76 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 GALR1P47211 349 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 TCL1AP56279 114 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 WNT3P56703 355 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 PPP1R1AQ13522 171 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 OR10A7Q8NGE5 316 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-206ENST00000438092 GPR137Q96N19 417 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 GPR27Q9NS67 375 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 OR6C3Q9NZP0 311 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 THYN1Q9P016 225 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 NAT8BQ9UHF3 227 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 TMEFF2Q9UIK5 374 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-206ENST00000438092 TRAV1-2A0A0B4J238 106 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 TRAV34A0A0B4J273 112 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 NKX2-8O15522 239 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 ORM1P02763 201 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 HTR1DP28221 377 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 DYNLT3P51808 116 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 SLC35E4Q6ICL7 350 aa9.13□□□□□ -0.95
SHPRH-206ENST00000438092 CDC42EP2O14613 210 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 NPY1RP25929 384 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ZNF141Q15928 474 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 PIGYQ3MUY2 71 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 LURAP1Q96LR2 239 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 TMEM140Q9NV12 185 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 TMSB15BA0A087X1C1 80 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ACP1P24666 158 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.955e-7■■■■□ 26.3
SHPRH-206ENST00000438092 JMJD6Q6NYC1 403 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ZBTB44Q8NCP5 570 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 SMRP1Q8NCR6 262 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ALG14Q96F25 216 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 RHOFQ9HBH0 211 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 GUCA2BQ16661 112 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 RGPD4Q7Z3J3 1758 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 A0A1B0GTQ1 180 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 A0A1B0GUH1 482 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ZNF737O75373 536 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 FPR2P25090 351 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 PLAURQ03405 335 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
SHPRH-206ENST00000438092 C11orf87Q6NUJ2 197 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 TPRX1Q8N7U7 411 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 C17orf47Q8NEP4 570 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 PRRX2Q99811 253 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 IL20Q9NYY1 176 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 VSIG4Q9Y279 399 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 SFTA3P0C7M3 94 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 RAC3P60763 192 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 TGIF1Q15583 401 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ZNF488Q96MN9 340 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 P2RX4Q99571 388 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 ZNF385DQ9H6B1 395 aa9.12□□□□□ -0.95
SHPRH-206ENST00000438092 WNT5AP41221 380 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 MMP15P51511 669 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 VWA1Q6PCB0 445 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 OR1K1Q8NGR3 316 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 ZNF596Q8TC21 504 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 VPS25Q9BRG1 176 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 GSX2Q9BZM3 304 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 SEMA7AO75326 666 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 POLR2GP62487 172 aaKnown RBP eCLIP9.11□□□□□ -0.95
SHPRH-206ENST00000438092 RAB32Q13637 225 aa9.11□□□□□ -0.95
SHPRH-206ENST00000438092 WDR74Q6RFH5 385 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-206ENST00000438092 NHLRC1Q6VVB1 395 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms