RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 IKZF1Q13422 519 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 ARFRP1Q13795 201 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 NKAPLQ5M9Q1 402 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 AGAP6Q5VW22 663 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 SHEQ5VZ18 495 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 MZT2BQ6NZ67 158 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 TRAPPC6BQ86SZ2 158 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 OR11L1Q8NGX0 322 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 COX4I2Q96KJ9 171 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 C11orf54Q9H0W9 315 aaPredicted RBP12.71□□□□□ -0.38
TMEM40-204ENST00000435218 SAP30LQ9HAJ7 183 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 RNF7Q9UBF6 113 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 GLS2Q9UI32 602 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 NPTNQ9Y639 398 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 CACNG2Q9Y698 323 aa12.71□□□□□ -0.38
TMEM40-204ENST00000435218 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 A0A1W2PPR1 153 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 CENPXA8MT69 81 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 PYCARD-AS1I3L0S3 204 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 IFNL4K9M1U5 179 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 SNU13P55769 128 aaKnown RBP12.7□□□□□ -0.38
TMEM40-204ENST00000435218 TAS2R19P59542 299 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 ATAD3CQ5T2N8 411 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 DCDC5Q6ZRR9 648 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 TMEM229BQ8NBD8 167 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 FAAP24Q9BTP7 215 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 WDR13Q9H1Z4 485 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 DECR2Q9NUI1 292 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
TMEM40-204ENST00000435218 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 WNT9BO14905 357 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 CD8AP01732 235 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 EGR1P18146 543 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 TBPP20226 339 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 DTYMKP23919 212 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 DUSP1P28562 367 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 RFX2P48378 723 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 RBM39Q14498 530 aaKnown RBP12.69□□□□□ -0.38
TMEM40-204ENST00000435218 GDPD3Q7L5L3 318 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 ZCCHC24Q8N2G6 241 aaKnown RBP12.69□□□□□ -0.38
TMEM40-204ENST00000435218 CHST6Q9GZX3 395 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 IFT46Q9NQC8 304 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 TREM2Q9NZC2 230 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 AK3Q9UIJ7 227 aa12.69□□□□□ -0.38
TMEM40-204ENST00000435218 MEIS3P1A6NDR6 274 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 MCRIP1C9JLW8 97 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 DEGS1O15121 323 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 OR2H2O95918 312 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 HAND1O96004 215 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 CD74P04233 296 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 SLC6A1P30531 599 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 BTCP35070 178 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 FAUP35544 74 aaKnown RBP12.68□□□□□ -0.38
TMEM40-204ENST00000435218 MDH2P40926 338 aaKnown RBP12.68□□□□□ -0.38
TMEM40-204ENST00000435218 PDCD1Q15116 288 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM40-204ENST00000435218 TRIM16LQ309B1 348 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 HOGA1Q86XE5 327 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 DUSP18Q8NEJ0 188 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 CYYR1Q96J86 154 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
TMEM40-204ENST00000435218 HRASLSQ9HDD0 168 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 NLKQ9UBE8 527 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 EDARQ9UNE0 448 aa12.68□□□□□ -0.38
TMEM40-204ENST00000435218 LINC00854A0A1B0GVQ3 168 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 LRRC30A6NM36 301 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 SLC33A1O00400 549 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 AKAIN1P0CW23 69 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 PLA2G2AP14555 144 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 ZNF44P15621 663 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 MUC1P15941 1255 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 MRPS15P82914 257 aaKnown RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 TEX36Q5VZQ5 186 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 Q6ZNX1 250 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 GVQW1Q8N7I0 195 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 TRAF4Q9BUZ4 470 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 DPCDQ9BVM2 203 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 RIMS4Q9H426 269 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 C12orf4Q9NQ89 552 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 WIPI2Q9Y4P8 454 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 LRRK2Q5S007 2527 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 TRBV6-6A0A0A6YYG2 114 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 ZNF736B4DX44 427 aaPredicted RBP12.67□□□□□ -0.38
TMEM40-204ENST00000435218 NAPSAO96009 420 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 SOD3P08294 240 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 IRF2P14316 349 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 KCNJ3P48549 501 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 PAX5Q02548 391 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 TLE4Q04727 773 aa12.67□□□□□ -0.38
TMEM40-204ENST00000435218 STEAP1BQ6NZ63 245 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms