RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 AMDHD2Q9Y303 409 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 PIGBOS1A0A0B4J2F0 54 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 KIR2DS1A0A191URI9 304 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 DUXBA0A1W2PPF3 345 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 FAM221AA4D161 298 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 KLRC4-KLRK1H3BQV0 150 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 ST8SIA3O43173 380 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 CDS2O95674 445 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 F10P00742 488 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 PPYP01298 95 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 IGHV3-9P01782 118 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 MBPP02686 304 aaPredicted RBP8.98□□□□□ -0.97
CD44-210ENST00000434472 GLAP06280 429 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SEC11BP0C7V7 166 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 CTRB1P17538 263 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 BCL3P20749 454 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 IL32P24001 234 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 KIR2DS4P43632 304 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 F2RL1P55085 397 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 PRSS12P56730 875 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 TMEM33P57088 247 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SPEM2Q0P670 501 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 KIR2DS1Q14954 304 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 PHLDA2Q53GA4 152 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 CTRB2Q6GPI1 263 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 OR2A2Q6IF42 318 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 TCEAL6Q6IPX3 200 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 BRICD5Q6PL45 260 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 BTNL8Q6UX41 500 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 FBXW12Q6X9E4 464 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 TMEM251Q8N6I4 163 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 OR4A4PQ8NGN8 299 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SLC39A7Q92504 469 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 DYRK2Q92630 601 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 TCEAL3Q969E4 200 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 MSI2Q96DH6 328 aaKnown RBP8.98□□□□□ -0.97
CD44-210ENST00000434472 ABHD14BQ96IU4 210 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 FER1L6-AS2Q96M78 137 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 HRH4Q9H3N8 390 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 RHOFQ9HBH0 211 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SPACA1Q9HBV2 294 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 Q9N2K0 584 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 UQCC1Q9NVA1 299 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 FOXJ2Q9P0K8 574 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 ZNF581Q9P0T4 197 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 RCC2Q9P258 522 aaKnown RBP8.98□□□□□ -0.97
CD44-210ENST00000434472 NDRG3Q9UGV2 375 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 MPC1Q9Y5U8 109 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 C3orf85A0A1B0GTC6 90 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 C5orf49A4QMS7 147 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 FAM166BA8MTA8 275 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 MPPED1O15442 326 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 NUPL2O15504 423 aaKnown RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 PHF1O43189 567 aaPredicted RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 SS18L1O75177 396 aaPredicted RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 FBXO24O75426 580 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 MT-CO3P00414 261 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 TK1P04183 234 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 SP1P08047 785 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 CCNOP22674 350 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 MAGEA5P43359 124 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 LPAR6P43657 344 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 RAB5CP51148 216 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 GNMTQ14749 295 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 SP6Q3SY56 376 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 HAGHLQ6PII5 290 aaPredicted RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 PUSL1Q8N0Z8 303 aaKnown RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 DEFB123Q8N688 67 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 TMEM105Q8N8V8 129 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 ZNF565Q8N9K5 539 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 NAXEQ8NCW5 288 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 OR5L1Q8NGL2 311 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 GLYATL2Q8WU03 294 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 NANOS1Q8WY41 292 aaKnown RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 GTF3AQ92664 365 aaKnown RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 SLAMF9Q96A28 289 aa8.97□□□□□ -0.97
CD44-210ENST00000434472 STRAPQ9Y3F4 350 aaKnown RBP8.97□□□□□ -0.97
CD44-210ENST00000434472 NCKAP5O14513 1909 aa8.96□□□□□ -0.97
CD44-210ENST00000434472 A0A096LPE4 126 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 A0A1W2PPZ6 126 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 FAM74A7A6NL05 159 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 OR5B21A6NL26 309 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 ANKRD30BLA7E2S9 258 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 ZNF732B4DXR9 585 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 TRDCB7Z8K6 153 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 RNASEK-C17orf49H0YIS7 233 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 GPR31O00270 319 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 NME2P1O60361 137 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 HLA-HP01893 362 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 CELA3AP09093 270 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 SP9P0CG40 484 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 RCC1P18754 421 aaPredicted RBP8.96□□□□□ -0.98
CD44-210ENST00000434472 PVALBP20472 110 aaPredicted RBP8.96□□□□□ -0.98
CD44-210ENST00000434472 NME2P22392 152 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 APLNRP35414 380 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 HAAOP46952 286 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 NPBWR2P48146 333 aa8.96□□□□□ -0.98
CD44-210ENST00000434472 RAB1AP62820 205 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms