RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 SH3BGRL3Q9H299 93 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 ZDBF2Q9HCK1 2354 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 GPR137BO60478 399 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 C1QL1O75973 258 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 SPP1P10451 314 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 CCL2P13500 99 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 HOXA6P31267 233 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 AKR1C3P42330 323 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 PEA15Q15121 130 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 ZNF528Q3MIS6 628 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 TRIM61Q5EBN2 209 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 SPINK14Q6IE38 97 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 WDR5BQ86VZ2 330 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 SLC35G3Q8N808 338 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 LYPD6BQ8NI32 183 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 C2CD4CQ8TF44 421 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 ARV1Q9H2C2 271 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 PARPBPQ9NWS1 579 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 FREM1Q5H8C1 2179 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 A0A096LPE4 126 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 A0A1W2PPZ6 126 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 MED19A0JLT2 244 aaPredicted RBP10.18□□□□□ -0.78
CD44-209ENST00000433892 ST8SIA3O43173 380 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 CYTIPO60759 359 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 PPYP01298 95 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 HEXAP06865 529 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 CYB561P49447 251 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 ASCL1P50553 236 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 SRYQ05066 204 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 TMEM211Q6ICI0 200 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 ZFP82Q8N141 532 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 CPNE4Q96A23 557 aaPredicted RBP10.18□□□□□ -0.78
CD44-209ENST00000433892 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 PAPOLGQ9BWT3 736 aaKnown RBP10.18□□□□□ -0.78
CD44-209ENST00000433892 C1QTNF5Q9BXJ0 243 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 CACFD1Q9UGQ2 172 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 KLF2Q9Y5W3 355 aaPredicted RBP10.18□□□□□ -0.78
CD44-209ENST00000433892 AHCTF1Q8WYP5 2266 aa10.18□□□□□ -0.78
CD44-209ENST00000433892 BORCS7-ASMTA0A0B4J1R7 106 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 SEC11BP0C7V7 166 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 DANCRP0C864 163 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 P2RY1P47900 373 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 UCP3P55916 312 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 GFRA1P56159 465 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 AVPI1Q5T686 147 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 DCAF12Q5T6F0 453 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 GPR157Q5UAW9 335 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 TIPARPQ7Z3E1 657 aaKnown RBP10.17□□□□□ -0.78
CD44-209ENST00000433892 HSD17B11Q8NBQ5 300 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 SMOC1Q9H4F8 434 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 CRIM1Q9NZV1 1036 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 FBXO9Q9UK97 447 aaPredicted RBP10.17□□□□□ -0.78
CD44-209ENST00000433892 RCL1Q9Y2P8 373 aaKnown RBP10.17□□□□□ -0.78
CD44-209ENST00000433892 NOSIPQ9Y314 301 aaKnown RBP10.17□□□□□ -0.78
CD44-209ENST00000433892 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 FAM186AA6NE01 2351 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 TMEM265A0A087WTH1 108 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 C3orf85A0A1B0GTC6 90 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 MPPED1O15442 326 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 MRPL33O75394 65 aaKnown RBP10.17□□□□□ -0.78
CD44-209ENST00000433892 CER1O95813 267 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 IGHEP01854 428 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 TDGF1P13385 188 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 BCL3P20749 454 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 SNCAP37840 140 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 CCDC71LQ8N9Z2 235 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 DMBX1Q8NFW5 382 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 OR56B2PQ8NGI1 322 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 CT55Q8WUE5 264 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 EXTL1Q92935 676 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 SLAMF9Q96A28 289 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 SPSB4Q96A44 273 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 GPHA2Q96T91 129 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 GINS3Q9BRX5 216 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 TMED3Q9Y3Q3 217 aa10.17□□□□□ -0.78
CD44-209ENST00000433892 COLCA2A8K830 154 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 HSPB6O14558 160 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 PRH1P02810 166 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 GLAP06280 429 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 GNRHRP30968 328 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 HAAOP46952 286 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 KCNJ3P48549 501 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 CAMLGP49069 296 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 GPM6AP51674 278 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 ARF1P84077 181 aaKnown RBP10.16□□□□□ -0.78
CD44-209ENST00000433892 FOXO1Q12778 655 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 IL13RA2Q14627 380 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 SPIN3Q5JUX0 258 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 SUMF1Q8NBK3 374 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 HPSE2Q8WWQ2 592 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 TECTBQ96PL2 329 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 EIF5A2Q9GZV4 153 aaKnown RBP10.16□□□□□ -0.78
CD44-209ENST00000433892 PRDM14Q9GZV8 571 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 FGF23Q9GZV9 251 aaPredicted RBP10.16□□□□□ -0.78
CD44-209ENST00000433892 PRO3102Q9H379 93 aa10.16□□□□□ -0.78
CD44-209ENST00000433892 ESRP2Q9H6T0 727 aaKnown RBP10.16□□□□□ -0.78
CD44-209ENST00000433892 LUZP4Q9P127 313 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms