RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DEGS1O15121 323 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 ZNF780AO75290 641 aaPredicted RBP12.83□□□□□ -0.36
TREX1-201ENST00000433541 OR2H2O95918 312 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 PAX2Q02962 417 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 PAX8Q06710 450 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 GPR176Q14439 515 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 ZNF146Q15072 292 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 PDCD1Q15116 288 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 OR8H2Q8N162 312 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 FOXRED1Q96CU9 486 aaPredicted RBP12.83□□□□□ -0.36
TREX1-201ENST00000433541 SNX22Q96L94 193 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 PPA2Q9H2U2 334 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 SF3B6Q9Y3B4 125 aaKnown RBP12.83□□□□□ -0.36
TREX1-201ENST00000433541 DSCAML1Q8TD84 2053 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 TRBV23-1A0A0A0MS06 115 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 K7N7A8 449 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
TREX1-201ENST00000433541 SC5DO75845 299 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 GTF2F2P13984 249 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 EPHA1P21709 976 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 GPR157Q5UAW9 335 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 C1orf229Q6ZS94 237 aaPredicted RBP12.82□□□□□ -0.36
TREX1-201ENST00000433541 TRAPPC6BQ86SZ2 158 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 CDH26Q8IXH8 852 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 BPIFB2Q8N4F0 458 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 POM121Q96HA1 1249 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 WDFY2Q96P53 400 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 UQCC2Q9BRT2 126 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 C19orf12Q9NSK7 152 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 OPN4Q9UHM6 478 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 SSR3Q9UNL2 185 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 ST3GAL6Q9Y274 331 aa12.82□□□□□ -0.36
TREX1-201ENST00000433541 MEX3AA1L020 520 aaKnown RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 OR7C1O76099 320 aaPredicted RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 HOXB4P17483 251 aaPredicted RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 PAN3Q58A45 887 aaKnown RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 KIAA2026Q5HYC2 2103 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 ATAD3CQ5T2N8 411 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 ELP2Q6IA86 826 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 C22orf42Q6IC83 251 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 LRRTM1Q86UE6 522 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 CHST4Q8NCG5 386 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 OR4S1Q8NGB4 309 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 OR4D6Q8NGJ1 314 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 TBC1D15Q8TC07 691 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 NEK7Q8TDX7 302 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 FAM46BQ96A09 425 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 MS4A7Q9GZW8 240 aaPredicted RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 CST11Q9H112 138 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 PPIL3Q9H2H8 161 aaKnown RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 BANF2Q9H503 90 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 IL36GQ9NZH8 169 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 STUB1Q9UNE7 303 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 AK6Q9Y3D8 172 aaKnown RBP12.81□□□□□ -0.36
TREX1-201ENST00000433541 NF1P21359 2839 aa12.81□□□□□ -0.36
TREX1-201ENST00000433541 LOC100506127A0A0U1RQW1 187 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 hCG_1809904A0A1W2PP81 198 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 A0A1W2PR64 198 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 A0A1W2PRV1 198 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 TMEM82A0PJX8 343 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 PDCD5O14737 125 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 MGST3O14880 152 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 PSPNO60542 156 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 ZNF737O75373 536 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 FPR2P25090 351 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 HTR2CP28335 458 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 GP2P55259 537 aaKnown RBP12.8□□□□□ -0.36
TREX1-201ENST00000433541 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
TREX1-201ENST00000433541 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 ATXN7L3Q14CW9 347 aaPredicted RBP12.8□□□□□ -0.36
TREX1-201ENST00000433541 VMO1Q7Z5L0 202 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 PDZD9Q8IXQ8 264 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 KIR3DL3Q8N743 410 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 TPRX1Q8N7U7 411 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 C8orf46Q8TAG6 207 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 LHX4Q969G2 390 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 DACT3Q96B18 629 aaPredicted RBP12.8□□□□□ -0.36
TREX1-201ENST00000433541 UPRTQ96BW1 309 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 SELENOIQ9C0D9 397 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 ZNF696Q9H7X3 374 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 SIRT7Q9NRC8 400 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 KPTNQ9Y664 436 aa12.8□□□□□ -0.36
TREX1-201ENST00000433541 JMJD1CQ15652 2540 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 TRDV1A0A1B0GX56 115 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 A0A1W2PP11 408 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
TREX1-201ENST00000433541 MPIG6BO95866 241 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 UBBP0CG47 229 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 MGMTP16455 207 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 CD36P16671 472 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 OR3A1P47881 315 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 P2RY14Q15391 338 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms