RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 CDK2P24941 298 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 DUSP1P28562 367 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 CD34P28906 385 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 OR3A1P47881 315 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 NPBWR2P48146 333 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 POU3F4P49335 361 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 CD69Q07108 199 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 DCTN2Q13561 401 aaKnown RBP11.86□□□□□ -0.51
PRKDC-203ENST00000432581 PRAMEF5Q5TYX0 476 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 SSX6Q7RTT6 188 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 OR51D1Q8NGF3 324 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 CORO2AQ92828 525 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 TBX5Q99593 518 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 WARS2Q9UGM6 360 aaKnown RBP11.86□□□□□ -0.51
PRKDC-203ENST00000432581 HHLA2Q9UM44 414 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 PCDHGB5Q9Y5G0 923 aa11.86□□□□□ -0.51
PRKDC-203ENST00000432581 A0A1W2PQL4 384 aaPredicted RBP11.85□□□□□ -0.51
PRKDC-203ENST00000432581 TCRBV3S1A0A5B6 114 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 ZAR1LA6NP61 321 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 TOR1AO14656 332 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 SH2D1BO14796 132 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
PRKDC-203ENST00000432581 BCL3P20749 454 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 PRKACBP22694 351 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 MNDAP41218 407 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 MTCP1P56278 107 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 HLA-DRB5Q30154 266 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 C12orf73Q69YU5 71 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 LINC00482Q8N8I6 264 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 CCDC197Q8NCU1 140 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 IL4I1Q96RQ9 567 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 EXOSC4Q9NPD3 245 aaKnown RBP11.85□□□□□ -0.51
PRKDC-203ENST00000432581 KRT84Q9NSB2 600 aa11.85□□□□□ -0.51
PRKDC-203ENST00000432581 LOC107986453A0A1B0GWG9 222 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 BUB1B-PAK6H3BSN5 160 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 SIRPB1O00241 398 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 AMY1AP04745 511 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 AMY2AP04746 511 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
PRKDC-203ENST00000432581 PRRX1P54821 245 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 KPNB1Q14974 876 aaKnown RBP11.84□□□□□ -0.51
PRKDC-203ENST00000432581 TPTE2P1Q5T6R2 138 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 BAIAP2L2Q6UXY1 529 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 LHFPL2Q6ZUX7 228 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 UTS2BQ765I0 119 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 OR4D6Q8NGJ1 314 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 BCAS4Q8TDM0 211 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 MCRIP2Q9BUT9 160 aaKnown RBP11.84□□□□□ -0.51
PRKDC-203ENST00000432581 HMG20AQ9NP66 347 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 ENOPH1Q9UHY7 261 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 GSTK1Q9Y2Q3 226 aa11.84□□□□□ -0.51
PRKDC-203ENST00000432581 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.51
PRKDC-203ENST00000432581 COL7A1Q02388 2944 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 MITFO75030 526 aaPredicted RBP11.83□□□□□ -0.52
PRKDC-203ENST00000432581 OR2H2O95918 312 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 CSN2P05814 226 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 EPHA2P29317 976 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 HTR1FP30939 366 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 PTGFRP43088 359 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 SNU13P55769 128 aaKnown RBP11.83□□□□□ -0.52
PRKDC-203ENST00000432581 PDZK1IP1Q13113 114 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 DNAL1Q4LDG9 190 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 FAM220AQ7Z4H9 259 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 MRPL41Q8IXM3 137 aaKnown RBP11.83□□□□□ -0.52
PRKDC-203ENST00000432581 PRSS35Q8N3Z0 413 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 OR10H4Q8NGA5 316 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
PRKDC-203ENST00000432581 SPSB1Q96BD6 273 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 RHOFQ9HBH0 211 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF286AQ9HBT8 521 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 PCDHB16Q9NRJ7 776 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
PRKDC-203ENST00000432581 MOB4Q9Y3A3 225 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 HSPE1-MOB4S4R3N1 261 aa11.83□□□□□ -0.52
PRKDC-203ENST00000432581 A0A087X0M5 115 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 IGKV1-9A0A0C4DH69 117 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 A0A1B0GX30 115 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 ODAMA1E959 279 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 FAM172BPA6NC97 362 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 SH2D7A6NKC9 451 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-203ENST00000432581 LY6LH3BQJ8 138 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 OCM2P0CE71 109 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 OCMP0CE72 109 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-203ENST00000432581 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 CALCBP10092 127 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF20P17024 532 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 ATF1P18846 271 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 LMO1P25800 156 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 SLC6A1P30531 599 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 ATP6V1E1P36543 226 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms