RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CBX5P45973 191 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 KLF3P57682 345 aaPredicted RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 RAB38P57729 211 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 IL5RAQ01344 420 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 FMODQ06828 376 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 IFFO1Q0D2I5 559 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 TPBGQ13641 420 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 Q499Y3 187 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 CAVIN4Q5BKX8 364 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 GLYATQ6IB77 296 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 SPICQ8N5J4 248 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 EIF4E3Q8N5X7 224 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 TRIML2Q8N7C3 387 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 ZNF321PQ8N8H1 164 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 DRAXINQ8NBI3 349 aaPredicted RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 OR4K17Q8NGC6 315 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 OR6K3Q8NGY3 331 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 C2orf15Q8WU43 125 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 TOP1MTQ969P6 601 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 APOBEC3DQ96AK3 386 aaPredicted RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 OTUB2Q96DC9 234 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 BCL7BQ9BQE9 202 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 C20orf144Q9BQM9 153 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 ANAPC13Q9BS18 74 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 MAP1LC3CQ9BXW4 147 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 DHX35Q9H5Z1 703 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 VSIRQ9H7M9 311 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 SND1-IT1Q9HBX3 110 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 ANKHQ9HCJ1 492 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 ACOT13Q9NPJ3 140 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 CA10Q9NS85 328 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 CARHSP1Q9Y2V2 147 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 KLF13Q9Y2Y9 288 aaPredicted RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 USH1CQ9Y6N9 552 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 SVILO95425 2214 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 NLRC5Q86WI3 1866 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 LTBP4Q8N2S1 1624 aa1□□□□□ -2.25
CDC40-204ENST00000431461 OTOGLQ3ZCN5 2332 aa1□□□□□ -2.25
CDC40-204ENST00000431461 BAZ1BQ9UIG0 1483 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 PHLPP2Q6ZVD8 1323 aa1□□□□□ -2.25
CDC40-204ENST00000431461 E7EQL1 145 aa1□□□□□ -2.25
CDC40-204ENST00000431461 DENRO43583 198 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 GMDSO60547 372 aa1□□□□□ -2.25
CDC40-204ENST00000431461 ZMPSTE24O75844 475 aa1□□□□□ -2.25
CDC40-204ENST00000431461 PDYNP01213 254 aa1□□□□□ -2.25
CDC40-204ENST00000431461 CD8AP01732 235 aa1□□□□□ -2.25
CDC40-204ENST00000431461 S100A9P06702 114 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 GUSBP08236 651 aa1□□□□□ -2.25
CDC40-204ENST00000431461 PSKH1P11801 424 aa1□□□□□ -2.25
CDC40-204ENST00000431461 PRPS1L1P21108 318 aa1□□□□□ -2.25
CDC40-204ENST00000431461 CNTFRP26992 372 aa1□□□□□ -2.25
CDC40-204ENST00000431461 FUSP35637 526 aaKnown RBP eCLIP1□□□□□ -2.25
CDC40-204ENST00000431461 GCLMP48507 274 aa1□□□□□ -2.25
CDC40-204ENST00000431461 C1QTNF8P60827 252 aa1□□□□□ -2.25
CDC40-204ENST00000431461 C2orf80Q0P641 193 aa1□□□□□ -2.25
CDC40-204ENST00000431461 STX4Q12846 297 aa1□□□□□ -2.25
CDC40-204ENST00000431461 DYNC1I2Q13409 638 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 MMDQ15546 238 aa1□□□□□ -2.25
CDC40-204ENST00000431461 BCL2A1Q16548 175 aa1□□□□□ -2.25
CDC40-204ENST00000431461 SPIN4Q56A73 249 aa1□□□□□ -2.25
CDC40-204ENST00000431461 PDZD11Q5EBL8 140 aa1□□□□□ -2.25
CDC40-204ENST00000431461 HBMQ6B0K9 141 aa1□□□□□ -2.25
CDC40-204ENST00000431461 LAMTOR1Q6IAA8 161 aa1□□□□□ -2.25
CDC40-204ENST00000431461 SLC25A25Q6KCM7 469 aa1□□□□□ -2.25
CDC40-204ENST00000431461 FAHD1Q6P587 224 aa1□□□□□ -2.25
CDC40-204ENST00000431461 DPPA2Q7Z7J5 298 aa1□□□□□ -2.25
CDC40-204ENST00000431461 MRPL52Q86TS9 123 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 ASCC1Q8N9N2 400 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 OR8G5Q8NG78 346 aa1□□□□□ -2.25
CDC40-204ENST00000431461 OR8S1Q8NH09 359 aa1□□□□□ -2.25
CDC40-204ENST00000431461 LRRC20Q8TCA0 184 aa1□□□□□ -2.25
CDC40-204ENST00000431461 TWIST2Q8WVJ9 160 aa1□□□□□ -2.25
CDC40-204ENST00000431461 ZCCHC13Q8WW36 166 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 RBPMSQ93062 196 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 CLDN23Q96B33 292 aa1□□□□□ -2.25
CDC40-204ENST00000431461 PPWD1Q96BP3 646 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 LRRC39Q96DD0 335 aa1□□□□□ -2.25
CDC40-204ENST00000431461 CMBLQ96DG6 245 aa1□□□□□ -2.25
CDC40-204ENST00000431461 BIRC8Q96P09 236 aa1□□□□□ -2.25
CDC40-204ENST00000431461 STACQ99469 402 aa1□□□□□ -2.25
CDC40-204ENST00000431461 OR2AG1Q9H205 316 aa1□□□□□ -2.25
CDC40-204ENST00000431461 MFSD1Q9H3U5 465 aa1□□□□□ -2.25
CDC40-204ENST00000431461 POMKQ9H5K3 350 aa1□□□□□ -2.25
CDC40-204ENST00000431461 ASB7Q9H672 318 aa1□□□□□ -2.25
CDC40-204ENST00000431461 TMEM38BQ9NVV0 291 aa1□□□□□ -2.25
CDC40-204ENST00000431461 ZMAT5Q9UDW3 170 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 ZNF229Q9UJW7 825 aa1□□□□□ -2.25
CDC40-204ENST00000431461 MMACHCQ9Y4U1 282 aa1□□□□□ -2.25
CDC40-204ENST00000431461 ICOSQ9Y6W8 199 aa1□□□□□ -2.25
CDC40-204ENST00000431461 FBN1P35555 2871 aaKnown RBP1□□□□□ -2.25
CDC40-204ENST00000431461 NACADO15069 1562 aa1□□□□□ -2.25
CDC40-204ENST00000431461 IGHV1-45A0A0A0MS14 117 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 LOC100653049A0A140TA62 436 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 A0A1W2PNN7 141 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 MGAT4DA6NG13 374 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 GGTLC3B5MD39 225 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 RNASEK-C17orf49H0YIS7 233 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 NDUFS8O00217 210 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 PLPP3O14495 311 aa0.99□□□□□ -2.25
CDC40-204ENST00000431461 TCF21O43680 179 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms