RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 UNQ9370/PRO34162Q6UXP9 181 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 LINC00114Q6XXX2 140 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 SAXO1Q8IYX7 474 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 NKX6-2Q9C056 277 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-208ENST00000430669 TRAV38-1A0A0B4J264 116 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 hADV38S2A0JD32 116 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 NTN1O95631 604 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 FGF2P09038 288 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 COX5BP10606 129 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 SLC25A53Q5H9E4 307 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 SOX7Q9BT81 388 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-208ENST00000430669 OIP5O43482 229 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 OR10V1Q8NGI7 309 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 SPRY3O43610 288 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
PTCH1-208ENST00000430669 ETFRF1Q6IPR1 90 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 C15orf54Q8N8G6 183 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 KCNE5Q9UJ90 142 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 POMT1Q9Y6A1 747 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 BTN1A1Q13410 526 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 ZNF426Q9BUY5 554 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 LOC390937A0A1W2PQ73 354 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 ZNF79Q15937 498 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 BATF2Q8N1L9 274 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 PRDM14Q9GZV8 571 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 PCNX1Q96RV3 2341 aa10.12□□□□□ -0.79
PTCH1-208ENST00000430669 J3QW42 95 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 C10orf128Q5T292 105 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 ANGPTL6Q8NI99 470 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 FGF11Q92914 225 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 RASL12Q9NYN1 266 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 LRP4O75096 1905 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 INTS1Q8N201 2190 aaKnown RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 HLA-DQB1P01920 261 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 KLHDC2Q9Y2U9 406 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 FAM221AA4D161 298 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 RECKO95980 971 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 AGFG1P52594 562 aaKnown RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 PPP1R3EQ9H7J1 279 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 TRBV5-7A0A0A0MS05 114 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 MPC2O95563 127 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 RAB4BP61018 213 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 TMEM182Q6ZP80 229 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 SMIM15Q7Z3B0 74 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 AKR1E2Q96JD6 320 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 TRAF4Q9BUZ4 470 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 IGKV1D-42A0A075B6H8 117 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 ZP3P21754 424 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 PRRX1P54821 245 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 ZNF345Q14585 488 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 CEACAM21Q3KPI0 293 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 RND1Q92730 232 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 S100PBPQ96BU1 408 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 WDR13Q9H1Z4 485 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 RPS10-NUDT3A0A1W2PQS6 291 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 RRASP10301 218 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 CD200P41217 278 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 SKA3Q8IX90 412 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 NFAM1Q8NET5 270 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 CMTM2Q8TAZ6 248 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 ADAT3Q96EY9 351 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 PUS1Q9Y606 427 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 NCOA6Q14686 2063 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-208ENST00000430669 TGOLN2O43493 480 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 CRYBA2P53672 197 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 FAM209AQ5JX71 171 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 WNT2BQ93097 391 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 AICDAQ9GZX7 198 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 TMEM74BQ9NUR3 256 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 NEUROG3Q9Y4Z2 214 aa10.11□□□□□ -0.79
PTCH1-208ENST00000430669 IFNL4K9M1U5 179 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 UPK3AO75631 287 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 TBX6O95947 436 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-208ENST00000430669 MBPP02686 304 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-208ENST00000430669 OR5AC1P0C628 307 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 KIR3DL2P43630 455 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
PTCH1-208ENST00000430669 HES1Q14469 280 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 ZPLD1Q8TCW7 415 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 RCL1Q9Y2P8 373 aaKnown RBP10.1□□□□□ -0.79
PTCH1-208ENST00000430669 A0A0J9YW62 118 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 INHBBP09529 407 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 PI3P19957 117 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 C1orf185Q5T7R7 199 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 TMEM56Q96MV1 263 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 GPR37O15354 613 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 NXPH3O95157 252 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 TTRP02766 147 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 BMP5P22003 454 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
PTCH1-208ENST00000430669 HOGA1Q86XE5 327 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms