RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 OR51A4Q8NGJ6 313 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 SPSB1Q96BD6 273 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 MBOAT4Q96T53 435 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 NEK6Q9HC98 313 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 EXOSC4Q9NPD3 245 aaKnown RBP13.74□□□□□ -0.21
TRIM39-209ENST00000428728 AASSQ9UDR5 926 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 MINOS1-NBL1R4GNA1 71 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 IGKV1-12A0A0C4DH73 117 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 J3QLW9 94 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 OR2H2O95918 312 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 IGKV1D-12P01611 117 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 ISG15P05161 165 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 ZNF19P17023 458 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 VDAC2P45880 294 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-209ENST00000428728 DYNLT3P51808 116 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 TRUB1Q8WWH5 349 aaKnown RBP13.73□□□□□ -0.21
TRIM39-209ENST00000428728 HRASLS5Q96KN8 279 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 C4orf36Q96KX1 117 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-209ENST00000428728 MMP28Q9H239 520 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 SEBOXQ9HB31 216 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-209ENST00000428728 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 ING3Q9NXR8 418 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 HHLA2Q9UM44 414 aa13.73□□□□□ -0.21
TRIM39-209ENST00000428728 J3QRE1 110 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 SH2D1BO14796 132 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 HTR1DP28221 377 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 BLCAPP62952 87 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 SCN1BQ07699 218 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 FDX2Q6P4F2 183 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 KCTD20Q7Z5Y7 419 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 ACBD7Q8N6N7 88 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 R3HDM4Q96D70 268 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 PELI1Q96FA3 418 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 GAL3ST2Q9H3Q3 398 aa13.72□□□□□ -0.21
TRIM39-209ENST00000428728 UBE2J1Q9Y385 318 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-209ENST00000428728 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 ZNF44P15621 663 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 CDK2P24941 298 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 CD24P25063 80 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 ERP29P30040 261 aaKnown RBP13.71□□□□□ -0.21
TRIM39-209ENST00000428728 GLIPR1P48060 266 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 SNRPGP62308 76 aaKnown RBP13.71□□□□□ -0.21
TRIM39-209ENST00000428728 AESQ08117 197 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 ALKBH1Q13686 389 aaKnown RBP13.71□□□□□ -0.21
TRIM39-209ENST00000428728 MEDAGQ5VYS4 303 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 ZBTB49Q6ZSB9 765 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 NDUFA11Q86Y39 141 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.21
TRIM39-209ENST00000428728 A0A1W2PRX2 142 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 OR4C45A6NMZ5 311 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 ADARB2-AS1A8MUL3 147 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 KDM4BO94953 1096 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 ALDOBP05062 364 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 HCKP08631 526 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 GDNFP39905 211 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 CCR9P51686 369 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 IL18R1Q13478 541 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 ATXN7L3Q14CW9 347 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-209ENST00000428728 KPRPQ5T749 579 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-209ENST00000428728 ABHD12Q8N2K0 398 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 WIPF2Q8TF74 440 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-209ENST00000428728 LGALS12Q96DT0 336 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 ALG8Q9BVK2 526 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 WNT10AQ9GZT5 417 aa13.7□□□□□ -0.22
TRIM39-209ENST00000428728 FUOMA2VDF0 154 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 H3BNX3 289 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 ALDH3A2P51648 485 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 EMX1Q04741 257 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-209ENST00000428728 KPNB1Q14974 876 aaKnown RBP13.69□□□□□ -0.22
TRIM39-209ENST00000428728 OXLD1Q5BKU9 147 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 SLC25A30Q5SVS4 291 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 LPCAT4Q643R3 524 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 OR52W1Q6IF63 320 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 HEPN1Q6WQI6 88 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 LHFPL3Q86UP9 236 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 CBR4Q8N4T8 237 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 OR4F17Q8NGA8 305 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
TRIM39-209ENST00000428728 OR4F4Q96R69 305 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 COMMD4Q9H0A8 199 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 ZCCHC4Q9H5U6 513 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 ZNF286AQ9HBT8 521 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
TRIM39-209ENST00000428728 GMPPBQ9Y5P6 360 aa13.69□□□□□ -0.22
TRIM39-209ENST00000428728 ODAMA1E959 279 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 SNTNA6NMZ2 147 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 FAM90A22PA8MWA6 464 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 HSPB6O14558 160 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 XPNPEP2O43895 674 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 MT-ND2P03891 347 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 TMEM225BP0DP42 221 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 DBTP11182 482 aaKnown RBP13.68□□□□□ -0.22
TRIM39-209ENST00000428728 PTGFRP43088 359 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 GALEQ14376 348 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 FBLN7Q53RD9 439 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms