RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TRAV18A0A075B6X5 111 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 A0A0A6YYH2 397 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 A6NJ64 397 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 H3BUI4 141 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 SOCS1O15524 211 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ADAM20O43506 726 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 PDCD6O75340 191 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 IGHV2-70P01814 119 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 CHRM2P08172 466 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 RPS2P15880 293 aaKnown RBP6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 FUT3P21217 361 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 PRDX2P32119 198 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 TNFSF8P32971 234 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM33P57088 247 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 TAS2R20P59543 309 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 IL13RA1P78552 427 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 COL10A1Q03692 680 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 IL18Q14116 193 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF146Q15072 292 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 MOGAT2Q3SYC2 334 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM131AQ6UXB0 335 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 SNX29P2Q8IUI4 249 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 SPICQ8N5J4 248 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 CD177Q8N6Q3 437 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM216BQ8N7L0 139 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM185AQ8NFB2 350 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR10R2Q8NGX6 335 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ANGPTL6Q8NI99 470 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 NINJ1Q92982 152 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ARHGAP5-AS1Q96IT6 56 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 CCL13Q99616 98 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM246Q9BRR3 403 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 PIMREGQ9BSJ6 248 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 DPCDQ9BVM2 203 aaPredicted RBP6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 PPA2Q9H2U2 334 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZMAT3Q9HA38 289 aaKnown RBP6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ING3Q9NXR8 418 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF222Q9UK12 451 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 PCDHB10Q9UN67 800 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 MRPS7Q9Y2R9 242 aaKnown RBP6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 CELSR2Q9HCU4 2923 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 MYO9AB2RTY4 2548 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 NOTCH2Q04721 2471 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 CRYBG3Q68DQ2 2970 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 POLQO75417 2590 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 TRAV24A0A0B4J272 114 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 A0A0G2JMP0 313 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 A0A0X1KG70 313 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 A0A1B0GW55 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 UBE2QL1A1L167 161 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM235A6NFC5 223 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 CEACAM18A8MTB9 384 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 MCRIP1C9JLW8 97 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 RAB27BO00194 218 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 NDUFS8O00217 210 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SLC33A1O00400 549 aaPredicted RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMPRSS2O15393 492 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 XRCC3O43542 346 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L2P0CJ85 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L3P0CJ86 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L4P0CJ87 422 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L5P0CJ88 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L6P0CJ89 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L7P0CJ90 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SELLP14151 372 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 HIST1H1DP16402 221 aaKnown RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 GNB3P16520 340 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 GIFP27352 417 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 CHATP28329 748 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 MNDAP41218 407 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DSCR9P59020 149 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 MRPS15P82914 257 aaKnown RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 ARFRP1Q13795 201 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 EDDM3AQ14507 147 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 ATXN7L3Q14CW9 347 aaPredicted RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 GRK1Q15835 563 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 CLEC12BQ2HXU8 276 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 RNASE12Q5GAN4 147 aaKnown RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 PLAC9Q5JTB6 97 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 Q5PR19 223 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SIGIRRQ6IA17 410 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 Q6P435 159 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 BRICD5Q6PL45 260 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4L9Q6RFH8 374 aaPredicted RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 BAIAP2L2Q6UXY1 529 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DCDC5Q6ZRR9 648 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 Q6ZTK2 550 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 NLRC3Q7RTR2 1065 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SLC36A1Q7Z2H8 476 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 C6orf201Q7Z4U5 140 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 RTN4RL2Q86UN3 420 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF561Q8N587 486 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM89BQ8N5H3 189 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SUMF2Q8NBJ7 301 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR4M2Q8NGB6 313 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 PPP1R35Q8TAP8 253 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 C10orf105Q8TEF2 133 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DYRK2Q92630 601 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SDSLQ96GA7 329 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms