RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 TRIP6Q15654 476 aaKnown RBP12.85□□□□□ -0.35
PTPRU-204ENST00000428026 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 STPG2Q8N412 459 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 M0R2Z0 102 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 GATCO43716 136 aaKnown RBP12.85□□□□□ -0.35
PTPRU-204ENST00000428026 RBP4P02753 201 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 SMIM17P0DL12 118 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 SMIM21Q3B7S5 101 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 OR2T6Q8NHC8 308 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 PIK3IP1Q96FE7 263 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 NEIL1Q96FI4 390 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-204ENST00000428026 IER2Q9BTL4 223 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 PSG11Q9UQ72 335 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 DHRS3O75911 302 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 NGFP01138 241 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 IGHV3-13P01766 116 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 IGHV3-7P01780 117 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 WFDC8Q8IUA0 241 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 NAT8Q9UHE5 227 aa12.85□□□□□ -0.35
PTPRU-204ENST00000428026 Q3ZCU0 254 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
PTPRU-204ENST00000428026 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 OR1N1Q8NGS0 311 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 MOB3AQ96BX8 217 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-204ENST00000428026 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 CXorf51AA0A1B0GTR3 108 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 CELA2BP08218 269 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-204ENST00000428026 MDKP21741 143 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-204ENST00000428026 APOBEC3DQ96AK3 386 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-204ENST00000428026 DOCK5Q9H7D0 1870 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 ZNF253O75346 499 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 OPRK1P41145 380 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 NXPH1P58417 271 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 LINC01555Q8NAE3 123 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 NRTNQ99748 197 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 EPHA8P29322 1005 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-204ENST00000428026 SPCS3P61009 180 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 FKBP11Q9NYL4 201 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 PAM16Q9Y3D7 125 aa12.84□□□□□ -0.35
PTPRU-204ENST00000428026 LILRA5A6NI73 299 aa12.83□□□□□ -0.35
PTPRU-204ENST00000428026 SOCS1O15524 211 aa12.83□□□□□ -0.35
PTPRU-204ENST00000428026 CTSVO60911 334 aa12.83□□□□□ -0.35
PTPRU-204ENST00000428026 S100A4P26447 101 aaKnown RBP12.83□□□□□ -0.35
PTPRU-204ENST00000428026 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.35
PTPRU-204ENST00000428026 EID2BQ96D98 161 aa12.83□□□□□ -0.35
PTPRU-204ENST00000428026 PRSS50Q9UI38 385 aa12.83□□□□□ -0.35
PTPRU-204ENST00000428026 PATE3B3GLJ2 98 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 CTDSPLO15194 276 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 PATE4P0C8F1 98 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 CA6P23280 308 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 C19orf57Q0VDD7 668 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 ADAD2Q8NCV1 583 aaKnown RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 MISP3Q96FF7 219 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 PECRQ9BY49 303 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 FRRS1LQ9P0K9 344 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 PMS2P1A4D2B8 440 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 IL2RAP01589 272 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 CCL2P13500 99 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 TMEM97Q5BJF2 176 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 LIAT1Q6ZQX7 453 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 SLC26A10Q8NG04 563 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 SPRY3O43610 288 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 KMT5CQ86Y97 462 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 OR10A7Q8NGE5 316 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 MCHR2Q969V1 340 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 SPACA9Q96E40 222 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 MVB12AQ96EY5 273 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 ZNF391Q9UJN7 358 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 NUP214P35658 2090 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 ALG1L2C9J202 215 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 H3BQ15 152 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 TMIGD3P0DMS9 266 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 PPOXP50336 477 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 PRICKLE4Q2TBC4 344 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
PTPRU-204ENST00000428026 C16orf47Q6ZP98 133 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 MRPL24Q96A35 216 aaKnown RBP12.83□□□□□ -0.36
PTPRU-204ENST00000428026 SPAG17Q6Q759 2223 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 TCF21O43680 179 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 FUT7Q11130 342 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 WIPI1Q5MNZ9 446 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-204ENST00000428026 ADIPOR1Q96A54 375 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 WDR13Q9H1Z4 485 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 ZNF785A8K8V0 405 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 KIR2DL1P43626 348 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms