RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CHCHD2Q9Y6H1 151 aaPredicted RBP12.12□□□□□ -0.47
RPL28-202ENST00000426763 PPIAL4EA0A075B759 164 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 PPIAL4DF5H284 164 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 SFT2D2O95562 160 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 CRHP06850 196 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 FGF2P09038 288 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 PPIAL4FP0DN26 164 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 TMEM11P17152 192 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 UBE2G1P62253 170 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 LPAR3Q9UBY5 353 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 ST6GALNAC2Q9UJ37 374 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 PPIAL4AQ9Y536 164 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 SOCS1O15524 211 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
RPL28-202ENST00000426763 MOB3AQ96BX8 217 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 SIGLEC12Q96PQ1 595 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 NAA60Q9H7X0 242 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 CLN8Q9UBY8 286 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 CD59P13987 128 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 GPR6P46095 362 aaPredicted RBP12.11□□□□□ -0.47
RPL28-202ENST00000426763 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
RPL28-202ENST00000426763 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 TIMP4Q99727 224 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 CD1AP06126 327 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 ZNF703Q9H7S9 590 aaPredicted RBP12.11□□□□□ -0.47
RPL28-202ENST00000426763 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 RNF24Q9Y225 148 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 MUC20Q8N307 709 aaPredicted RBP12.11□□□□□ -0.47
RPL28-202ENST00000426763 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 IMMP1LQ96LU5 166 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 NUDT16L1Q9BRJ7 211 aaKnown RBP12.11□□□□□ -0.47
RPL28-202ENST00000426763 GINS3Q9BRX5 216 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 GPR27Q9NS67 375 aa12.11□□□□□ -0.47
RPL28-202ENST00000426763 IGKV1D-42A0A075B6H8 117 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 TEX30Q5JUR7 227 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
RPL28-202ENST00000426763 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 RAB18Q9NP72 206 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 ANKRD20A5PA0PJZ0 165 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 PMELP40967 661 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 OR4S2Q8NH73 311 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 PCNPQ8WW12 178 aaKnown RBP12.1□□□□□ -0.47
RPL28-202ENST00000426763 SOX7Q9BT81 388 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 ZSWIM8A7E2V4 1837 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
RPL28-202ENST00000426763 CTDSPLO15194 276 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 COX7A2P2O60397 106 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 NPBWR1P48145 328 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
RPL28-202ENST00000426763 C9orf172C9J069 976 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 CDK2AP1O14519 115 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 OR13D1Q8NGV5 346 aa12.1□□□□□ -0.47
RPL28-202ENST00000426763 H3BP45 60 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 OR7C2O60412 319 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 FGF7P21781 194 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 CCL8P80075 99 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 TGFBR3LH3BV60 316 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 IGHV3-13P01766 116 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 IGHV3-7P01780 117 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ADRA2AP08913 450 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 BMI1P35226 326 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ROM1Q03395 351 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ETFRF1Q6IPR1 90 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 RPS4Y2Q8TD47 263 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 GP6Q9HCN6 339 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 CISD1Q9NZ45 108 aaKnown RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 TRAF3IP2O43734 574 aaPredicted RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 UMODP07911 640 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 SLC25A6P12236 298 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 RAG2P55895 527 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 PPP1R1AQ13522 171 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ADAMTS17Q8TE56 1095 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 WDR89Q96FK6 387 aaPredicted RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 AICDAQ9GZX7 198 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 MED9Q9NWA0 146 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 IGHV3OR15-7A0A075B7D8 119 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 472.4 ms