RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 PRB1P04280 392 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 ANXA3P12429 323 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 PTAFRP25105 342 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 TSPAN5P62079 268 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 TMEM108Q6UXF1 575 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 Q6ZR03 302 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 SLC25A42Q86VD7 318 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
CDK3-201ENST00000425876 IGLV3-9A0A075B6K5 115 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 POM121CA8CG34 1229 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 MCRIP1C9JLW8 97 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 H0YL77 283 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 C1QBP02746 253 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 OR4E1P0C645 316 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 ECI1P42126 302 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 UBE2MP61081 183 aaKnown RBP12.24□□□□□ -0.45
CDK3-201ENST00000425876 IKZF1Q13422 519 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 NOXA1Q86UR1 476 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 POC1AQ8NBT0 407 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 NUP37Q8NFH4 326 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 ZNF431Q8TF32 576 aaPredicted RBP12.24□□□□□ -0.45
CDK3-201ENST00000425876 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 DMRTB1Q96MA1 342 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 ZNF488Q96MN9 340 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 RIMS4Q9H426 269 aaPredicted RBP12.24□□□□□ -0.45
CDK3-201ENST00000425876 ZNF286AQ9HBT8 521 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 EHFQ9NZC4 300 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 ZNF69Q9UC07 566 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 KALRNO60229 2985 aa12.24□□□□□ -0.45
CDK3-201ENST00000425876 IGKV1D-8A0A087WSZ0 117 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 CDIPTO14735 213 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 PTBP3O95758 552 aaKnown RBP12.23□□□□□ -0.45
CDK3-201ENST00000425876 NAPSAO96009 420 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 CXCL3P19876 107 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 CD200P41217 278 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 KLF3P57682 345 aaPredicted RBP12.23□□□□□ -0.45
CDK3-201ENST00000425876 TAS2R31P59538 309 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 ARPC4P59998 168 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 ZNF146Q15072 292 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 PDCD1Q15116 288 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
CDK3-201ENST00000425876 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 BRICD5Q6PL45 260 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 PEG10Q86TG7 708 aaKnown RBP12.23□□□□□ -0.45
CDK3-201ENST00000425876 BATF2Q8N1L9 274 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 HES4Q9HCC6 221 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 IL36RNQ9UBH0 155 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 GPR132Q9UNW8 380 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 OSGIN2Q9Y236 505 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 ESPL1Q14674 2120 aa12.23□□□□□ -0.45
CDK3-201ENST00000425876 ATP6V1G2-DDX39BF2Z307 99 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 GRPP07492 148 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 FPR2P25090 351 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 ERP29P30040 261 aaKnown RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 GZMKP49863 264 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 ASCL1P50553 236 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 SELENOVP59797 346 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 RBM39Q14498 530 aaKnown RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 IGFBP7Q16270 282 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 MSMPQ1L6U9 139 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 FBXL19-AS1Q494R0 122 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 SPIN3Q5JUX0 258 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 Q6P435 159 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 TMED4Q7Z7H5 227 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 C11orf53Q8IXP5 236 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 MUC20Q8N307 709 aaPredicted RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 MSL2Q9HCI7 577 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 ZNF222Q9UK12 451 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 TRBV6-6A0A0A6YYG2 114 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 TRAV24A0A0B4J272 114 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 F5H5P2 479 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 C1QL1O75973 258 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 NXPH2O95156 264 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 THBDP07204 575 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 ZBTB25P24278 435 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 AADACL3Q5VUY0 350 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 SHEQ5VZ18 495 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 ZNF660Q6AZW8 331 aaPredicted RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 FIP1L1Q6UN15 594 aaKnown RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 DHRS11Q6UWP2 260 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 SUMF2Q8NBJ7 301 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 TMEM185AQ8NFB2 350 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 OR52B4Q8NGK2 314 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 MARCH1Q8TCQ1 289 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 CAPSLQ8WWF8 208 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 DYRK2Q92630 601 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 DHRS9Q9BPW9 319 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 ZNF436Q9C0F3 470 aaPredicted RBP12.22□□□□□ -0.45
CDK3-201ENST00000425876 FN3KRPQ9HA64 309 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 NGBQ9NPG2 151 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 DECR2Q9NUI1 292 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 TREM2Q9NZC2 230 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 DUSP13Q9UII6 198 aa12.22□□□□□ -0.45
CDK3-201ENST00000425876 SHANK1Q9Y566 2161 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms