RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 IL13RA2Q14627 380 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 P4HA3Q7Z4N8 544 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 OR2C3Q8N628 320 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 TCTEX1D2Q8WW35 142 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 HSF4Q9ULV5 492 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 STRAPQ9Y3F4 350 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 CACNA1GO43497 2377 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ADAMTS9Q9P2N4 1935 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 C3orf85A0A1B0GTC6 90 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 FBP1P09467 338 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 TCN2P20062 427 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 SPINK2P20155 84 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ATP6V0CP27449 155 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 NTF4P34130 210 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 NKX2-1P43699 371 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 NPBWR2P48146 333 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF92Q03936 586 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF239Q16600 458 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 CXorf66Q5JRM2 361 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 SLC25A26Q70HW3 274 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 NEK7Q8TDX7 302 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 C10orf35Q96D05 121 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 MPPED1O15442 326 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TRAPPC6AO75865 159 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 PPYP01298 95 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 LIFP15018 202 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 RGS19P49795 217 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 RAB5CP51148 216 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 DSCR4P56555 118 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 HIST1H3AP68431 136 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 MRPS34P82930 218 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 EIF3IQ13347 325 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 RAB35Q15286 201 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 HIST2H3PS2Q5TEC6 136 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 LHFPL2Q6ZUX7 228 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 HIST2H3AQ71DI3 136 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 GPR137CQ8N3F9 429 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 FGFBP3Q8TAT2 258 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 PAPOLGQ9BWT3 736 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 ANGPTL4Q9BY76 406 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TMED3Q9Y3Q3 217 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TRBV23-1A0A0A0MS06 115 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 PDCD6O75340 191 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CLN5O75503 358 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 DKK1O94907 266 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 YIF1AO95070 293 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 IFNA17P01571 189 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 OR8U8P0C7N1 319 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 GNRHRP30968 328 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 PSG4Q00888 419 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 PCOLCEQ15113 449 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF468Q5VIY5 522 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 C9orf135Q5VTT2 229 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF385CQ66K41 422 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 AAED1Q7RTV5 226 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CALHM1Q8IU99 346 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 OR14L1PQ8NHC6 308 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 HPSE2Q8WWQ2 592 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 MOB3AQ96BX8 217 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TUBA4BQ9H853 241 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 SLC7A10Q9NS82 523 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 FOXD3Q9UJU5 478 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 A0A087WZY1 265 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 IGSF23A1L1A6 192 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 RBFOX3A6NFN3 312 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF724A8MTY0 619 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 AP4M1O00189 453 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 ATXN7O15265 892 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TOX3O15405 576 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 ADAM20O43506 726 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TNFSF12O43508 249 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 SYNGR3O43761 229 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CXCL13O43927 109 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 F10P00742 488 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 JMJD7P0C870 316 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CRYGSP22914 178 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 PAX6P26367 422 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 TAGLN2P37802 199 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 SSR4P51571 173 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CARD18P57730 90 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 KIAA0141Q14154 515 aaPredicted RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CEACAM16Q2WEN9 425 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 RPS19BP1Q86WX3 136 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 OR5C1Q8NGR4 320 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 BOD1Q96IK1 185 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 MRPS17Q9Y2R5 130 aaKnown RBP6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 LIPGQ9Y5X9 500 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 CACNA1EQ15878 2313 aa6.51□□□□□ -1.37
SMARCC1-202ENST00000425518 HSD17B6O14756 317 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 KLK3P07288 261 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 FUT3P21217 361 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 EIF2S3P41091 472 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 FUT6P51993 359 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 SUCLG1P53597 346 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 NDUFA6P56556 154 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 UBE2KP61086 200 aa6.5□□□□□ -1.37
SMARCC1-202ENST00000425518 RPS23P62266 143 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms