RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 WIPF2Q8TF74 440 aaPredicted RBP9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 FGGYQ96C11 551 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 HRASLS5Q96KN8 279 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 MYCBPQ99417 103 aaPredicted RBP9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 RHOFQ9HBH0 211 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 HMG20AQ9NP66 347 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 FRRS1LQ9P0K9 344 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 HILPDAQ9Y5L2 63 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 FAM90A22PA8MWA6 464 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 G3V4G9 280 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 J3QRE1 110 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 SIRPB1O00241 398 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 EI24O14681 340 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 SH2D1BO14796 132 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 KDM4BO94953 1096 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 OR2H2O95918 312 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 RPSAP08865 295 aaKnown RBP9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 CD28P10747 220 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 HTR1DP28221 377 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 DUSP1P28562 367 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 VDAC2P45880 294 aaPredicted RBP9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 ARHGDIBP52566 201 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 SNU13P55769 128 aaKnown RBP9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 NANOS3P60323 173 aaKnown RBP9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 EMX1Q04741 257 aaPredicted RBP9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 NSUN5P1Q3KNT7 163 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 ARSJQ5FYB0 599 aaPredicted RBP9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 HEPN1Q6WQI6 88 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 C16orf82Q7Z2V1 217 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 REC114Q7Z4M0 266 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 RTN4RL2Q86UN3 420 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 ACBD7Q8N6N7 88 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 CHST4Q8NCG5 386 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 OR4F17Q8NGA8 305 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 OR4P4Q8NGL7 312 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 OR13C3Q8NGS6 347 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 OR13C9Q8NGT0 318 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 ZNF596Q8TC21 504 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 PYDC1Q8WXC3 89 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 AKR1E2Q96JD6 320 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 OR4F4Q96R69 305 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 WNT10AQ9GZT5 417 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 COMMD4Q9H0A8 199 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 GSTK1Q9Y2Q3 226 aa9.29□□□□□ -0.92
SQSTM1-203ENST00000422245 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 IGKV1-12A0A0C4DH73 117 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 OR4C45A6NMZ5 311 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 IGKV1D-12P01611 117 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 CSN2P05814 226 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 ALDH3A2P51648 485 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 BDH1Q02338 343 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 PRAMEF5Q5TYX0 476 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 HIST2H2BDQ6DRA6 164 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 ZFP1Q6P2D0 407 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 SAXO1Q8IYX7 474 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 SYS1Q8N2H4 156 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 OR5D18Q8NGL1 313 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 OR10AC1Q8NH08 325 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 CAPSLQ8WWF8 208 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 RFT1Q96AA3 541 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 CREB3L1Q96BA8 519 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 PELI1Q96FA3 418 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 C4orf36Q96KX1 117 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 TAS2R3Q9NYW6 316 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 DPM3Q9P2X0 92 aa9.28□□□□□ -0.92
SQSTM1-203ENST00000422245 ODAMA1E959 279 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 E9PQ18 207 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 J3QLW9 94 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 MMP23AO75900 390 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 CALCBP10092 127 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 ZNF44P15621 663 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 ZNF19P17023 458 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 JUNBP17275 347 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 CDK2P24941 298 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 LMO1P25800 156 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 CD34P28906 385 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 BRS3P32247 399 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 PTGFRP43088 359 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 BLCAPP62952 87 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 MRPL28Q13084 256 aaKnown RBP9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 ALKBH1Q13686 389 aaKnown RBP9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 LYG1Q8N1E2 194 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 ABHD12Q8N2K0 398 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 OR51A4Q8NGJ6 313 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 CORO2AQ92828 525 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 R3HDM4Q96D70 268 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 LGALS12Q96DT0 336 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 CPNE2Q96FN4 548 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 OR5M11Q96RB7 305 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 CITED2Q99967 270 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 ALG8Q9BVK2 526 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 ZCCHC4Q9H5U6 513 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 LIN7BQ9HAP6 207 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 INPP5EQ9NRR6 644 aa9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 EXOGQ9Y2C4 368 aaKnown RBP9.27□□□□□ -0.93
SQSTM1-203ENST00000422245 TMEM212A6NML5 194 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 LEUTXA8MZ59 168 aa9.26□□□□□ -0.93
SQSTM1-203ENST00000422245 SULT1B1O43704 296 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms