RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 C20orf204Q6ZNR8 217 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 OR5T2Q8NGG2 359 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CHMP1AQ9HD42 196 aaPredicted RBP7.53□□□□□ -1.2
SNCA-206ENST00000420646 DIDO1Q9BTC0 2240 aaKnown RBP7.53□□□□□ -1.2
SNCA-206ENST00000420646 DCHS2Q6V1P9 2916 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 MSGN1A6NI15 193 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CD8AP01732 235 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 SCTP09683 121 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CALCRP30988 508 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CBX5P45973 191 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 LUMP51884 338 aaPredicted RBP7.53□□□□□ -1.2
SNCA-206ENST00000420646 FAM189A2Q15884 450 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CLEC9AQ6UXN8 241 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 PEG10Q86TG7 708 aaKnown RBP7.53□□□□□ -1.2
SNCA-206ENST00000420646 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 OR5L1Q8NGL2 311 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 EXTL1Q92935 676 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 DHRS9Q9BPW9 319 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 OPN3Q9H1Y3 402 aaPredicted RBP7.53□□□□□ -1.2
SNCA-206ENST00000420646 OR5AC2Q9NZP5 309 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 TEX13DA0A0J9YY54 714 aaPredicted RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 I3L521 148 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 SIGLEC5O15389 551 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PDCD6O75340 191 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 FUT3P21217 361 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 CD82P27701 267 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PIGPP57054 158 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 ZMYND11Q15326 602 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 FAM214BQ7L5A3 538 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 TMEM185AQ8NFB2 350 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PXT1Q8NFP0 134 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 GMPPAQ96IJ6 420 aaPredicted RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 RNF126Q9BV68 326 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 CLCF1Q9UBD9 225 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 ZNF391Q9UJN7 358 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 COL6A6A6NMZ7 2263 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 HELZ2Q9BYK8 2649 aaKnown RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 TRAV17A0A0B4J275 112 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 OR6C65A6NJZ3 312 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 CRHP06850 196 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 ZNF14P17017 642 aaPredicted RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 RCC1P18754 421 aaPredicted RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 ACTBL2Q562R1 376 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PXDC1Q5TGL8 231 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 WDR86Q86TI4 376 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PRR18Q8N4B5 295 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 OR5P3Q8WZ94 311 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 DCUN1D4Q92564 292 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 HIST1H2AAQ96QV6 131 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 ZNF471Q9BX82 626 aaPredicted RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 C12orf4Q9NQ89 552 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 TNFSF18Q9UNG2 199 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PLCE1Q9P212 2302 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 POLEQ07864 2286 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 LGALS8O00214 317 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 SS18L1O75177 396 aaPredicted RBP7.52□□□□□ -1.21
SNCA-206ENST00000420646 GRPP07492 148 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 NMBP08949 121 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 PSMB6P28072 239 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 MPV17P39210 176 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 S100A10P60903 97 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 RAB14P61106 215 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 RAB32Q13637 225 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 TOR2AQ5JU69 321 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 ZNF610Q8N9Z0 462 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 CCDC54Q8NEL0 328 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 DKK4Q9UBT3 224 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 HSF4Q9ULV5 492 aa7.52□□□□□ -1.21
SNCA-206ENST00000420646 ANKRD30BLA7E2S9 258 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 CEACAM18A8MTB9 384 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 TRAPPC2LH3BP13 241 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 SLC33A1O00400 549 aaPredicted RBP7.51□□□□□ -1.21
SNCA-206ENST00000420646 CDIPTO14735 213 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 IGHG3P01860 377 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 OR5AC1P0C628 307 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 RPA2P15927 270 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 M6PRP20645 277 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 CEBPDP49716 269 aaPredicted RBP7.51□□□□□ -1.21
SNCA-206ENST00000420646 ESCO2Q56NI9 601 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 FAHD2BQ6P2I3 314 aaPredicted RBP7.51□□□□□ -1.21
SNCA-206ENST00000420646 ZNF826PQ6ZT77 177 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 GALNT11Q8NCW6 608 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 THAP6Q8TBB0 222 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 SLC25A40Q8TBP6 338 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 MRPL24Q96A35 216 aaKnown RBP7.51□□□□□ -1.21
SNCA-206ENST00000420646 FAHD2AQ96GK7 314 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 TINAGQ9UJW2 476 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 C14orf166Q9Y224 244 aaKnown RBP7.51□□□□□ -1.21
SNCA-206ENST00000420646 ZGRF1Q86YA3 2104 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 A0A0B4J2A0 478 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 SMPD2O60906 423 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 SCGB1D2O95969 90 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 AADACP22760 399 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 FABP6P51161 128 aa7.51□□□□□ -1.21
SNCA-206ENST00000420646 PSG7Q13046 419 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms