RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MMP24Q9Y5R2 645 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 SSSCA1O60232 199 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 VAMP5O95183 116 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 FKBP2P26885 142 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 RPS10P46783 165 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 EIF3IQ13347 325 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 HAGHQ16775 308 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 FAM27BQ5VT28 67 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 YRDCQ86U90 279 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 OR1F12Q8NHA8 337 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 SCRT1Q9BWW7 348 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 SRXN1Q9BYN0 137 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 ARV1Q9H2C2 271 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 HSF4Q9ULV5 492 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 PTRH2Q9Y3E5 179 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 CST7O76096 145 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 OR2C1O95371 312 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 CCL20P78556 96 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 OR2C3Q8N628 320 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 SLC7A11Q9UPY5 501 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 STRAPQ9Y3F4 350 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 ZIC3O60481 467 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 IGHV3-9P01782 118 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 TCN2P20062 427 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 PAX6P26367 422 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 RAB35Q15286 201 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF239Q16600 458 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 CCDC71LQ8N9Z2 235 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 WNT16Q9UBV4 365 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 URGCP-MRPS24S4R325 110 aa13.14□□□□□ -0.31
SEMA3B-203ENST00000419007 LIFP15018 202 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 CCNOP22674 350 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 MRPS34P82930 218 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 LHFPL2Q6ZUX7 228 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 MR1Q95460 341 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 C3orf85A0A1B0GTC6 90 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF727A8MUV8 499 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 NKX2-1P43699 371 aaPredicted RBP13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 VAMP2P63027 116 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 HIST1H3AP68431 136 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 HIST2H3PS2Q5TEC6 136 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 SLC25A26Q70HW3 274 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 HIST2H3AQ71DI3 136 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
SEMA3B-203ENST00000419007 SYNGR3O43761 229 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 PPYP01298 95 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 ATP6V0CP27449 155 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 RAB5CP51148 216 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 DSCR4P56555 118 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF92Q03936 586 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 GPR137CQ8N3F9 429 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 TCTEX1D2Q8WW35 142 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 HPSE2Q8WWQ2 592 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 MOB3AQ96BX8 217 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 TOX3O15405 576 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 PDCD6O75340 191 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 DKK1O94907 266 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 OR8U8P0C7N1 319 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 CRYGSP22914 178 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 NTF4P34130 210 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 NPBWR2P48146 333 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 PCOLCEQ15113 449 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 RHEBQ15382 184 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 OR14L1PQ8NHC6 308 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 ANGPTL4Q9BY76 406 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 PCED1AQ9H1Q7 454 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 CEP192Q8TEP8 1941 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 A0A087WZY1 265 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 MPPED1O15442 326 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 CLN5O75503 358 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 FBP1P09467 338 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 SPINK2P20155 84 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 CXorf66Q5JRM2 361 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 CALHM1Q8IU99 346 aa13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 METTL1Q9UBP6 276 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 ZMAT5Q9UDW3 170 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-203ENST00000419007 IGSF23A1L1A6 192 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 GNRHRP30968 328 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 SSR4P51571 173 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 SUCLG1P53597 346 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF468Q5VIY5 522 aaPredicted RBP13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 AAED1Q7RTV5 226 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 OR5C1Q8NGR4 320 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 TAAR9Q96RI9 348 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 PAPOLGQ9BWT3 736 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 SLC7A10Q9NS82 523 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms