RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 LIPNQ5VXI9 398 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF776Q68DI1 518 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF343Q6P1L6 599 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ULK3Q6PHR2 472 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ATRAIDQ6UW56 229 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SIGLEC15Q6ZMC9 328 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF600Q6ZNG1 722 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 HIST2H3AQ71DI3 136 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SSX6Q7RTT6 188 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 LYG2Q86SG7 212 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SLC25A42Q86VD7 318 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ANGPTL5Q86XS5 388 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MISPQ8IVT2 679 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SERPINA12Q8IW75 414 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 BAP18Q8IXM2 172 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CMTM8Q8IZV2 173 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 PUSL1Q8N0Z8 303 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 GABRG1Q8N1C3 465 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 KDM8Q8N371 416 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF561Q8N587 486 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CLEC1AQ8NC01 280 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 RELL2Q8NC24 303 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 SDR9C7Q8NEX9 313 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 VN1R2Q8NFZ6 395 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR4K17Q8NGC6 315 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR4K14Q8NGD5 310 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR52E2Q8NGJ4 325 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR51S1Q8NGJ8 323 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR52B4Q8NGK2 314 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR5AR1Q8NGP9 310 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR9A2Q8NGT5 310 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR2A1Q8NGT9 310 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 PFN4Q8NHR9 129 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CD99L2Q8TCZ2 262 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SAP25Q8TEE9 199 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 NPRL2Q8WTW4 380 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MITD1Q8WV92 249 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 LIPHQ8WWY8 451 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ASB17Q8WXJ9 295 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR8D1Q8WZ84 308 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 KLK6Q92876 244 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MCHR2Q969V1 340 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MALSU1Q96EH3 234 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 PIK3IP1Q96FE7 263 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 C16orf58Q96GQ5 468 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 COX14Q96I36 57 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SMIM8Q96KF7 97 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SCGB3A2Q96PL1 93 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 OR5B2Q96R09 309 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SDF2Q99470 211 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 TIMM29Q9BSF4 260 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 HCAR1Q9BXC0 346 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SLC17A9Q9BYT1 436 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SMDT1Q9H4I9 107 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 FNDC4Q9H6D8 234 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 TMEM185BQ9H7F4 350 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 LYRM4Q9HD34 91 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MRPS30Q9NP92 439 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 TREM1Q9NP99 234 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ASF1BQ9NVP2 202 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 THAP10Q9P2Z0 257 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 METTL1Q9UBP6 276 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 CHRNA9Q9UGM1 479 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CLEC4EQ9ULY5 219 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MEMO1Q9Y316 297 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 NOP16Q9Y3C1 178 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 MRPS18CQ9Y3D5 142 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF337Q9Y3M9 751 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ATG4BQ9Y4P1 393 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 KPTNQ9Y664 436 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 TICRRQ7Z2Z1 1910 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MUC22E2RYF6 1773 aaPredicted RBP2.15□□□□□ -2.06
VPS41-206ENST00000418457 LAMA2P24043 3122 aaKnown RBP2.15□□□□□ -2.06
VPS41-206ENST00000418457 IGLV4-3A0A075B6K6 122 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 TRAV27A0A087WT01 109 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 A0A087WUJ7 227 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 A0A087X0K7 114 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 IGKV3D-20A0A0C4DH25 116 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 IGHV3-38A0A0C4DH36 116 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 A0A1B0GWA3 101 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 LOC390937A0A1W2PQ73 354 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 C9orf170A2RU37 121 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 OR6C74A6NCV1 312 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 OR4C45A6NMZ5 311 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 ZNF729A6NN14 1252 aaPredicted RBP2.15□□□□□ -2.07
VPS41-206ENST00000418457 CEACAM18A8MTB9 384 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 SULT2B1O00204 365 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 ZNF208O43345 1280 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 TGOLN2O43493 480 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 OR2T1O43869 369 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 FADS1O60427 444 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 UPK3AO75631 287 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 EIF3GO75821 320 aaKnown RBP eCLIP2.15□□□□□ -2.07
VPS41-206ENST00000418457 F10P00742 488 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 RENP00797 406 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 IFNA10P01566 189 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 IFNA17P01571 189 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 CXCL10P02778 98 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 GAPDHP04406 335 aaKnown RBP2.15□□□□□ -2.07
VPS41-206ENST00000418457 CRYBA1P05813 215 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms