RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SMARCD2Q92925 531 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM203Q969S6 136 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 PINX1Q96BK5 328 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 C8orf44Q96CB5 159 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 MRPS24Q96EL2 167 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NARS2Q96I59 477 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NKX3-1Q99801 234 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARHGDIGQ99819 225 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 PRRT1Q99946 306 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC25A21Q9BQT8 299 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RSG1Q9BU20 258 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 EBPLQ9BY08 206 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ULBP2Q9BZM5 246 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NKX6-2Q9C056 277 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CHRNA10Q9GZZ6 450 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 PCBD2Q9H0N5 130 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RNF122Q9H9V4 155 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPS10P5Q9NQ39 176 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 MIEF1Q9NQG6 463 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC17A5Q9NRA2 495 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CTPS2Q9NRF8 586 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 COA4Q9NYJ1 87 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RASL12Q9NYN1 266 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CLN8Q9UBY8 286 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 MLXQ9UH92 298 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OPN4Q9UHM6 478 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 KLK13Q9UKR3 277 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC22A13Q9Y226 551 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CARHSP1Q9Y2V2 147 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 WDR45Q9Y484 360 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TNS1Q9HBL0 1735 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A087WUU8 490 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PPIAL4CA0A0B4J2A2 164 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 DAPL1A0PJW8 107 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 LRRC30A6NM36 301 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 E7EQ34 232 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 NPIPA7E9PJI5 369 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 F8VVB4 439 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 F8VWA3 439 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 HMGN4O00479 90 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SRPX2O60687 465 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 KRT33AO76009 404 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 RCBTB2O95199 551 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CLDN1O95832 211 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 IFNA5P01569 189 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD8AP01732 235 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OPN1SWP03999 348 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 BCHEP06276 602 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIF4EP06730 217 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 DCNP07585 359 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 NPIPA8P0DM63 369 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PPIAL4GP0DN37 164 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC2A1P11166 492 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CXCL2P19875 107 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PMCHP20382 165 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 HTR2CP28335 458 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 GABRR2P28476 465 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SRD5A2P31213 254 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 DUTP33316 252 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SPINT3P49223 89 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PGFP49763 221 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM33P57088 247 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIF5AP63241 154 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OC90Q02509 493 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF415Q09FC8 603 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 GGTLC2Q14390 218 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 GANABQ14697 944 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 GPNMBQ14956 572 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 EXOSC7Q15024 291 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 HMGN3Q15651 99 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 LTB4RQ15722 352 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF74Q16587 644 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ISXQ2M1V0 245 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CHRFAM7AQ494W8 412 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ACSM3Q53FZ2 586 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIPR1Q53HC9 387 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PAN3Q58A45 887 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAM219BQ5XKK7 198 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF660Q6AZW8 331 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIF5AL1Q6IS14 154 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAHD2BQ6P2I3 314 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 FUT10Q6P4F1 479 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPL22L1Q6P5R6 122 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ULK3Q6PHR2 472 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PAQR6Q6TCH4 344 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 DRAM2Q6UX65 266 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 LRRN1Q6UXK5 716 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 IL34Q6ZMJ4 242 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF620Q6ZNG0 422 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 MBOAT2Q6ZWT7 520 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 FCRLAQ7L513 359 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 C6orf120Q7Z4R8 191 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CPEB2Q7Z5Q1 589 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 KCNRGQ8N5I3 272 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 C12orf45Q8N5I9 185 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CLDN19Q8N6F1 224 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4K1Q8NGD4 311 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR52L1Q8NGH7 329 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR6T1Q8NGN1 323 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms