RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MRGPRGQ86SM5 289 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 ZNF321PQ8N8H1 164 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 SLC25A43Q8WUT9 341 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 RAB40CQ96S21 281 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 ELOVL1Q9BW60 279 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 LYRM2Q9NU23 88 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 TRBV11-1A0A0K0K1C0 115 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 A0A1W2PNR3 127 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 CHST1O43916 411 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 SRP19P09132 144 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 FAM78BQ5VT40 261 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 MRPL21Q7Z2W9 205 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 SFTPA1Q8IWL2 248 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM230Q96A57 120 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 SPSB1Q96BD6 273 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 C8orf44Q96CB5 159 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 C2orf88Q9BSF0 95 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 HDGFL3Q9Y3E1 203 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 HEATR5BQ9P2D3 2071 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 H0YIG0 161 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 IFI6P09912 130 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 SMIM10L1P0DMW3 83 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM252Q8N6L7 170 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 KLHDC1Q8N7A1 406 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 SMIM10Q96HG1 83 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 KCNIP1Q9NZI2 227 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 LTBP4Q8N2S1 1624 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 MPPED1O15442 326 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 COX5AP20674 150 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 PMP22Q01453 160 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 VAMP3Q15836 100 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 ANAPC16Q96DE5 110 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 PLEKHA3Q9HB20 300 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 UBE2L5PA0A1B0GUS4 154 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 LRP5LA4QPB2 252 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 NRASP01111 189 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 FOXK1P85037 733 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 SHBQ15464 509 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 FAM58AQ8N1B3 248 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 OR4C5Q8NGB2 326 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 LIPHQ8WWY8 451 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM9BQ9NQ34 198 aa12.22□□□□□ -0.45
CLTCL1-201ENST00000412649 FASLGP48023 281 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 FOXF1Q12946 379 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 SEC16AO15027 2179 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 DUX1O43812 170 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 SOD3P08294 240 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 CNN1P51911 297 aaKnown RBP12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 COL5A1-AS1Q5SY13 56 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 DNM1P46Q6ZS02 220 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 PLXDC1Q8IUK5 500 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 OR10J5Q8NHC4 309 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 CALHM2Q9HA72 323 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 FAM60AQ9NP50 221 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 PAM16Q9Y3D7 125 aa12.21□□□□□ -0.45
CLTCL1-201ENST00000412649 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF506Q5JVG8 444 aa12.21□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.46
CLTCL1-201ENST00000412649 SHDQ96IW2 340 aa12.21□□□□□ -0.46
CLTCL1-201ENST00000412649 MYO9BQ13459 2157 aa12.21□□□□□ -0.46
CLTCL1-201ENST00000412649 DXOO77932 396 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 CCL5P13501 91 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 FUT3P21217 361 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 MSX1P28360 303 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 PLP2Q04941 152 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 EGR4Q05215 589 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 OR52M1Q8NGK5 317 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 EGLN1Q9GZT9 426 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 GCM1Q9NP62 436 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 LRRC75AQ8NAA5 344 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 OXGR1Q96P68 337 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF665Q9H7R5 613 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TRDCB7Z8K6 153 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 SIAH2O43255 324 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TRAPPC6AO75865 159 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TUSC2O75896 110 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 VDAC1P21796 283 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 PPP1CAP62136 330 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TNFRSF9Q07011 255 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 SRD5A3Q9H8P0 318 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 C9J4A7 227 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms