RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A40Q8TBP6 338 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CIB3Q96Q77 187 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CHRDL1Q9BU40 450 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CDCA4Q9BXL8 241 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 SIRT7Q9NRC8 400 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CABIN1Q9Y6J0 2220 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 TIAM2Q8IVF5 1701 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF547Q8IVP9 402 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 ENDOGQ14249 297 aaKnown RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 ETFRF1Q6IPR1 90 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 MIEN1Q9BRT3 115 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CISD1Q9NZ45 108 aaKnown RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 DIMT1Q9UNQ2 313 aaKnown RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A35Q3KQZ1 300 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 OR1K1Q8NGR3 316 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 GPX8Q8TED1 209 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 VSTM2LQ96N03 204 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 TMEM30AQ9NV96 361 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 M0R3E3 92 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 LY6DQ14210 128 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 NSUN5P1Q3KNT7 163 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 PMS2CLQ68D20 193 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 PDPNQ86YL7 162 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 REG1AP05451 166 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 NUBP1P53384 320 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 OR5H6Q8NGV6 325 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CNRIP1Q96F85 164 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 NOL4LQ96MY1 436 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF552Q9H707 407 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CMC2Q9NRP2 79 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 CACNG5Q9UF02 275 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 TOX3O15405 576 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 FABP5Q01469 135 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 TEX261Q6UWH6 196 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF738Q8NE65 137 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 DOCK8Q8NF50 2099 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 C19orf54Q5BKX5 351 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 C1orf185Q5T7R7 199 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 GTF2H5Q6ZYL4 71 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 OR2G2Q8NGZ5 317 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 TECRQ9NZ01 308 aaKnown RBP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 E5RGE8 158 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HAND1O96004 215 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 OTUD1Q5VV17 481 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 STXBP6Q8NFX7 210 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 PTX4Q96A99 478 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 STARD4Q96DR4 205 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 FLRT3Q9NZU0 649 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 A0A0B4J293 547 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 RAB19A4D1S5 217 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 OR4E1P0C645 316 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 SLC35B1P78383 322 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HMGN3Q15651 99 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 OR8A1Q8NGG7 326 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HARBI1Q96MB7 349 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 FKBP11Q9NYL4 201 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 COL11A1P12107 1806 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 ATAD5Q96QE3 1844 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HSPB2A8KAH6 182 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 CYB5R3P00387 301 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 LTBRP36941 435 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HSPB2Q16082 182 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 SPANXN1Q5VSR9 72 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 ZBTB44Q8NCP5 570 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 CCL13Q99616 98 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 AMDHD2Q9Y303 409 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 SEC16AO15027 2179 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 PROB1E7EW31 1015 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HRKO00198 91 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 PPP1R2P9O14990 202 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 CT62P0C5K7 136 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 PPP1CCP36873 323 aaKnown RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 NKG7Q16617 165 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 EBLN2Q6P2I7 272 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 ABI3BPQ7Z7G0 1075 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 DIRC2Q96SL1 478 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 IGHV3-49A0A0A0MS15 119 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 TMEM200CA6NKL6 621 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF324O75467 553 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 PRSS8Q16651 343 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 UNQ9370/PRO34162Q6UXP9 181 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 MAVSQ7Z434 540 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 METTL26Q96S19 204 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 OR6C3Q9NZP0 311 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 INTS1Q8N201 2190 aaKnown RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 MRPS11P82912 194 aaKnown RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 GPNMBQ14956 572 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 NANOGP1Q8N7R0 232 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 FAM210BQ96KR6 192 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A21Q9BQT8 299 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 LILRA5A6NI73 299 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 SS18L1O75177 396 aaPredicted RBP7.44□□□□□ -1.22
SCN9A-203ENST00000409672 HSBP1O75506 76 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 GALR1P47211 349 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms