RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 UQCC2Q9BRT2 126 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 KCNK15Q9H427 330 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 FBLN5Q9UBX5 448 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF69Q9UC07 566 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ELF5Q9UKW6 265 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 RAB22AQ9UL26 194 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 DNAJC9-AS1A6NH13 148 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF726A6NNF4 738 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 G3V3Q6 166 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SYT7O43581 403 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SCGNO76038 276 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 OR2A4O95047 310 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 BPNT1O95861 308 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ANXA7P20073 488 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF133P52736 654 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 KLF3P57682 345 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 GNG2P59768 71 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 RAP2BP61225 183 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SPRNQ5BIV9 151 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 KLF17Q5JT82 389 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 STEAP1BQ6NZ63 245 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 CFAP77Q6ZQR2 320 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SLC22A24Q8N4F4 322 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 JAGN1Q8N5M9 183 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SLC30A7Q8NEW0 376 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 OR1M1Q8NGA1 313 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 TMEM54Q969K7 222 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 FGGYQ96C11 551 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 OR2A7Q96R45 310 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 NUDT16L1Q9BRJ7 211 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 GINS4Q9BRT9 223 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 TMEM138Q9NPI0 162 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 MMP26Q9NRE1 261 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 MGAT4CQ9UBM8 478 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SLC23A1Q9UHI7 598 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 POLR1DQ9Y2S0 133 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SOX21Q9Y651 276 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 A0A1B0GTI1 187 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 UBE2QL1A1L167 161 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 VSIG10L2P0DP72 767 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 CCL1P22362 96 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 PRTN3P24158 256 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 FPR2P25090 351 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 ZBTB37Q5TC79 503 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 FOXL2NBQ6ZUU3 175 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 DEFB108BQ8NET1 73 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 OR1J2Q8NGS2 313 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 OR2T35Q8NGX2 323 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 ALX4Q9H161 411 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 PIPOXQ9P0Z9 390 aa10.67□□□□□ -0.7
CHRNA1-205ENST00000409542 METTL21EPA6NDL7 271 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 CD74P04233 296 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 CD3DP04234 171 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 QDPRP09417 244 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 RAB3AP20336 220 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 CSNK1A1P48729 337 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 GSK3AP49840 483 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 UCP2P55851 309 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 LSM6P62312 80 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 GRB2P62993 217 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 QRFPP83859 136 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 SRSF4Q08170 494 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 C10orf128Q5T292 105 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 DOK3Q7L591 496 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 OR4D6Q8NGJ1 314 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 ASB13Q8WXK3 278 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 AQP3Q92482 292 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 FAM46BQ96A09 425 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 ADAT3Q96EY9 351 aaPredicted RBP10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 HEXA-AS1Q9H8Q6 139 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 CNTD2Q9H8S5 307 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 PNRC2Q9NPJ4 139 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 DECR2Q9NUI1 292 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 TMEM38BQ9NVV0 291 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 DCAF16Q9NXF7 216 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 GLTPQ9NZD2 209 aa10.66□□□□□ -0.7
CHRNA1-205ENST00000409542 TRAPPC2LH3BP13 241 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 TPD52L2O43399 206 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 RAB3DO95716 219 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 IGHV1-46P01743 117 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF20P17024 532 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 C4BPBP20851 252 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 MPZP25189 248 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 SELENOVP59797 346 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 TAF13Q15543 124 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 MPPED2Q15777 294 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 C6orf183Q5T699 404 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 TEX261Q6UWH6 196 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 OR2W3Q7Z3T1 314 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 OR8H1Q8NGG4 311 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 OR4D10Q8NGI6 311 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 OR51S1Q8NGJ8 323 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 CCDC107Q8WV48 283 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 CCL17Q92583 94 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 RAB1CQ92928 201 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 GAL3ST1Q99999 423 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 SLC25A21Q9BQT8 299 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms