RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 C8orf44Q96CB5 159 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 SMIM10Q96HG1 83 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 JSRP1Q96MG2 331 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 SERINC2Q96SA4 455 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 APOOQ9BUR5 198 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 FGF22Q9HCT0 170 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 PLAGL1Q9UM63 463 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 TRBV23OR9-2A0A075B6M9 112 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 NSG1A0A0A6YYJ2 146 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 GPR89AB7ZAQ6 455 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 HSBP1L1C9JCN9 74 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 NDUFS8O00217 210 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PITX3O75364 302 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SYNGR4O95473 234 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 GPR89BP0CG08 455 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 MMP9P14780 707 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RAC2P15153 192 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 FUT3P21217 361 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 ACP1P24666 158 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PTGER4P35408 488 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RAB28P51157 221 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CTXN1P60606 82 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 UBE2NP61088 152 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 YPEL5P62699 121 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CCL20P78556 96 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 ZFP36L1Q07352 338 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 NFATC4Q14934 902 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC22A6Q4U2R8 563 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 ALG10Q5BKT4 473 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 HES3Q5TGS1 186 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 C1orf189Q5VU69 101 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 TEX43Q6ZNM6 134 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SSX7Q7RTT5 188 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RD3Q7Z3Z2 195 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CISD2Q8N5K1 135 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 LINC01555Q8NAE3 123 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PTPMT1Q8WUK0 201 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 OR1E3Q8WZA6 343 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 DDIT4LQ96D03 193 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 COX14Q96I36 57 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF845Q96IR2 970 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 DIRC2Q96SL1 478 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 FAAP24Q9BTP7 215 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 OR2J1Q9GZK6 312 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 C11orf1Q9H5F2 150 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CNTD2Q9H8S5 307 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 GPR35Q9HC97 309 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 GRHPRQ9UBQ7 328 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RALYQ9UKM9 306 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SCN2AQ99250 2005 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PTPRQQ9UMZ3 2332 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 UNC13CQ8NB66 2214 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 TRBV11-1A0A0K0K1C0 115 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CLEC18AA5D8T8 446 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SOX15O60248 233 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 TOMM40O96008 361 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CT45A8P0DMV1 189 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CT45A9P0DMV2 189 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PSMB5P28074 263 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SFTPDP35247 375 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RAB38P57729 211 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RUNX2Q13950 521 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 HYAL4Q2M3T9 481 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CT45A2Q5DJT8 189 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 C1orf140Q5VVS0 124 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 C1QL3Q5VWW1 255 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 GUSBP11Q6P575 273 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PLXDC2Q6UX71 529 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 H1FOOQ8IZA3 346 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 GCNT2Q8N0V5 402 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 FBXL14Q8N1E6 418 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 FAM89BQ8N5H3 189 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 C2orf73Q8N5S3 287 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CLEC18CQ8NCF0 446 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CPEB3Q8NE35 698 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 KCNG3Q8TAE7 436 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 NUS1Q96E22 293 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SMIM3Q9BZL3 60 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 PARP12Q9H0J9 701 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 LPAR5Q9H1C0 372 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 RBKSQ9H477 322 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SRA1Q9HD15 236 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 LYRM4Q9HD34 91 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 Q9N2K0 584 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 FBXO34Q9NWN3 711 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 HSF4Q9ULV5 492 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 SLC22A13Q9Y226 551 aa9.29□□□□□ -0.92
NIF3L1-204ENST00000409357 CFAP46Q8IYW2 2715 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 IGKV1D-42A0A075B6H8 117 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 YPEL1O60688 119 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 C1QL1O75973 258 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 NXPH2O95156 264 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 GNB3P16520 340 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 KLK2P20151 261 aa9.28□□□□□ -0.92
NIF3L1-204ENST00000409357 GLRA1P23415 457 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms