RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 PEX2P28328 305 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 POU3F4P49335 361 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 RBP2P50120 134 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 LHFPL4Q7Z7J7 247 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 DNAAF1Q8NEP3 725 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 CNIH3Q8TBE1 160 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 PIFOQ8TCI5 191 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 RFT1Q96AA3 541 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 CDCA4Q9BXL8 241 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 INPP5EQ9NRR6 644 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 IL36RNQ9UBH0 155 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 TCF19Q9Y242 345 aa17.01■□□□□ 0.31
RHBDD3-202ENST00000406335 TK1P04183 234 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 ALDOBP05062 364 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 ARG1P05089 322 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 LIMS3P0CW19 117 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 LIMS4P0CW20 117 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 VDAC2P45880 294 aaPredicted RBP17■□□□□ 0.31
RHBDD3-202ENST00000406335 NPBWR2P48146 333 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 ATP1B3P54709 279 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 COL10A1Q03692 680 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 ZNF691Q5VV52 312 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 TMEM200BQ69YZ2 307 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 C11orf87Q6NUJ2 197 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 ZNF782Q6ZMW2 699 aaPredicted RBP17■□□□□ 0.31
RHBDD3-202ENST00000406335 CYGBQ8WWM9 190 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 SPACA5Q96QH8 159 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 PDCD1LG2Q9BQ51 273 aa17■□□□□ 0.31
RHBDD3-202ENST00000406335 FGF20Q9NP95 211 aaPredicted RBP17■□□□□ 0.31
RHBDD3-202ENST00000406335 CALCBP10092 127 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 CCL3L1P16619 93 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 BCL3P20749 454 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 MTCP1P56278 107 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 SSX2Q16385 188 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 KLHL22Q53GT1 634 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 EGFL6Q8IUX8 553 aa16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 ASCC1Q8N9N2 400 aaKnown RBP16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 EMG1Q92979 244 aaKnown RBP16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 RBFOX1Q9NWB1 397 aaKnown RBP16.99■□□□□ 0.31
RHBDD3-202ENST00000406335 K7N7A8 449 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 ZNF737O75373 536 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 ZFPL1O95159 310 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 PIPP12273 146 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 PRKACBP22694 351 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 GTF2A1P52655 376 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 GBX2P52951 348 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 CD69Q07108 199 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 DYNC1I2Q13409 638 aaKnown RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 ZNF273Q14593 569 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 CCBE1Q6UXH8 406 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 LHFPL2Q6ZUX7 228 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 Q8N2B8 174 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 C11orf42Q8N5U0 333 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 OR5AU1Q8NGC0 362 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 OR13C9Q8NGT0 318 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 OR13D1Q8NGV5 346 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 FOXRED1Q96CU9 486 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 MALSU1Q96EH3 234 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 OPALINQ96PE5 141 aa16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 MYCBPQ99417 103 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-202ENST00000406335 MEX3AA1L020 520 aaKnown RBP16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 VGLL3A8MV65 326 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 K7EIL1 84 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 CHRM2P08172 466 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 DUSP1P28562 367 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 ETV1P50549 477 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 SLC35A2P78381 396 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 ADARB1P78563 741 aaKnown RBP16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 XAF1Q6GPH4 301 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 CENPVQ7Z7K6 275 aaPredicted RBP16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 WFDC9Q8NEX5 89 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 OR5AK2Q8NH90 309 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 SPSB1Q96BD6 273 aa16.97■□□□□ 0.31
RHBDD3-202ENST00000406335 IGKV1-12A0A0C4DH73 117 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 TRBV2A0A0J9YWF9 115 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 TCRBV4S1A1TA0A5B7 111 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 TMEM82A0PJX8 343 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 MEGF11A6BM72 1044 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 A6NDX4 124 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 TMEM212A6NML5 194 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 ADARB2-AS1A8MUL3 147 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 F2RL2O00254 374 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 IGKV1D-12P01611 117 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 SNU13P55769 128 aaKnown RBP16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 BLCAPP62952 87 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 PDZK1IP1Q13113 114 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 OR2G6Q5TZ20 316 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 TTC23Q5W5X9 447 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 FAM58AQ8N1B3 248 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 DYNAPQ8N1N2 210 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 DHRSXQ8N5I4 330 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 PACRGLQ8N7B6 248 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 OR5D18Q8NGL1 313 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 JAM3Q9BX67 310 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 COMMD4Q9H0A8 199 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 ZCCHC4Q9H5U6 513 aa16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 TBL2Q9Y4P3 447 aaKnown RBP16.96■□□□□ 0.31
RHBDD3-202ENST00000406335 HAND1O96004 215 aa16.95■□□□□ 0.3
RHBDD3-202ENST00000406335 CYB5AP00167 134 aa16.95■□□□□ 0.3
RHBDD3-202ENST00000406335 MT-ND2P03891 347 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms