RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CLCC1Q96S66 551 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF442Q9H7R0 627 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PILRBQ9UKJ0 227 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ZDHHC8Q9ULC8 765 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 C3orf85A0A1B0GTC6 90 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 FAM221AA4D161 298 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 MPPED1O15442 326 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF205O95201 554 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 AADACP22760 399 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 FOLR3P41439 243 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF266Q14584 549 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 CEACAM16Q2WEN9 425 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 NRN1LQ496H8 165 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 AWAT1Q58HT5 328 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ZFP82Q8N141 532 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 SLC35G3Q8N808 338 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 OR2V1Q8NHB1 315 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 HPSE2Q8WWQ2 592 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ABHD14BQ96IU4 210 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ADGRG7Q96K78 797 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 TAAR9Q96RI9 348 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 SPIN2AQ99865 258 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 SPIN2BQ9BPZ2 258 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PRDM14Q9GZV8 571 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PARP12Q9H0J9 701 aaKnown RBP9.28□□□□□ -0.92
CLIP4-204ENST00000404424 IFT22Q9H7X7 185 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PARPBPQ9NWS1 579 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ATPIF1Q9UII2 106 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 TRDCB7Z8K6 153 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 NTN3O00634 580 aaPredicted RBP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 CXCL13O43927 109 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 PATE4P0C8F1 98 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 RGS19P49795 217 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 NHLH2Q02577 135 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 RHEBQ15382 184 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 ZNF468Q5VIY5 522 aaPredicted RBP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 PMS2CLQ68D20 193 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 OR11L1Q8NGX0 322 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 BOD1Q96IK1 185 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 TMEM56Q96MV1 263 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 TMEM222Q9H0R3 208 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 SLC35B3Q9H1N7 401 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 SPACA1Q9HBV2 294 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 TMEM56-RWDD3S4R434 201 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 TRIOO75962 3097 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 LAMA1P25391 3075 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 OR7C1O76099 320 aaPredicted RBP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 DUSP3P51452 185 aaPredicted RBP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 RND3P61587 244 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 EWSR1Q01844 656 aaKnown RBP eCLIP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 ZFP36L1Q07352 338 aaKnown RBP9.27□□□□□ -0.93
CLIP4-204ENST00000404424 AKIRIN2Q53H80 203 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 DPPA2Q7Z7J5 298 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 WDR5BQ86VZ2 330 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 OR2C3Q8N628 320 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 ZNF611Q8N823 705 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 OR8G5Q8NG78 346 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 OR1J1Q8NGS3 322 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 OR10D3Q8NH80 312 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 TP53RKQ96S44 253 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 C11orf1Q9H5F2 150 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 KCNJ16Q9NPI9 418 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 SIT1Q9Y3P8 196 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 SPEGQ15772 3267 aa9.27□□□□□ -0.93
CLIP4-204ENST00000404424 PI4KAP42356 2102 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 DUXBA0A1W2PPF3 345 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 CCDC85CA6NKD9 419 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 UMAD1C9J7I0 102 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 K7N7A8 449 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 S100A8P05109 93 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 SNRNP70P08621 437 aaKnown RBP9.26□□□□□ -0.93
CLIP4-204ENST00000404424 AGAP20933 346 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 PRSS12P56730 875 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 CLDN15P56746 228 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 RAB1AP62820 205 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 TRIM61Q5EBN2 209 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 ETV3LQ6ZN32 361 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 HSD17B11Q8NBQ5 300 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 CPNE4Q96A23 557 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-204ENST00000404424 SLC25A31Q9H0C2 315 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 FSCN3Q9NQT6 498 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 C5orf52A6NGY3 159 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 M0R036 132 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 CYTIPO60759 359 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 S100A6P06703 90 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 MMP7P09237 267 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-204ENST00000404424 GLI4P10075 376 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 CCL4P13236 92 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 EDN3P14138 238 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 ZNF44P15621 663 aa9.26□□□□□ -0.93
CLIP4-204ENST00000404424 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-204ENST00000404424 FHITP49789 147 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms