RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 GUSBP1Q15486 140 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 FAM74A1Q5RGS3 127 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 PRSS54Q6PEW0 395 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 TFAP2EQ6VUC0 442 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 P4HA3Q7Z4N8 544 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
CDC42-203ENST00000400259 OR1S1Q8NH92 325 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 OR10C1Q96KK4 312 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 ZNF442Q9H7R0 627 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 METTL8Q9H825 291 aaKnown RBP13.5□□□□□ -0.25
CDC42-203ENST00000400259 RASL12Q9NYN1 266 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 MTCH1Q9NZJ7 389 aa13.5□□□□□ -0.25
CDC42-203ENST00000400259 ZNF629Q9UEG4 869 aaPredicted RBP13.5□□□□□ -0.25
CDC42-203ENST00000400259 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 ANKRD30BLA7E2S9 258 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 MPTX1A8MV57 137 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 ZNF728P0DKX0 622 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 PDZD9Q8IXQ8 264 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 HIST1H2AAQ96QV6 131 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 IFT22Q9H7X7 185 aa13.49□□□□□ -0.25
CDC42-203ENST00000400259 FAM186AA6NE01 2351 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 FAM221AA4D161 298 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 AQP7O14520 342 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 ZNF14P17017 642 aaPredicted RBP13.48□□□□□ -0.25
CDC42-203ENST00000400259 LINC00596Q86U02 117 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 DCUN1D4Q92564 292 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 EXTL1Q92935 676 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 GALNT14Q96FL9 552 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 CACNA1GO43497 2377 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 F8VVB4 439 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 F8VWA3 439 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 NAPSAO96009 420 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 PET100P0DJ07 73 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 LUMP51884 338 aaPredicted RBP13.48□□□□□ -0.25
CDC42-203ENST00000400259 TGFBR3Q03167 851 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 RBM39Q14498 530 aaKnown RBP13.48□□□□□ -0.25
CDC42-203ENST00000400259 PDCD1Q15116 288 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 TBC1D28Q2M2D7 210 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 FBXW12Q6X9E4 464 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 STOML3Q8TAV4 291 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 PLK3Q9H4B4 646 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 MEMO1Q9Y316 297 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 SHANK1Q9Y566 2161 aa13.48□□□□□ -0.25
CDC42-203ENST00000400259 CNOT4O95628 575 aaKnown RBP13.47□□□□□ -0.25
CDC42-203ENST00000400259 IGHV1-2P23083 117 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 FCGR2CP31995 323 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 GLP1RP43220 463 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 PIGPP57054 158 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 GNG3P63215 75 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 FAM214BQ7L5A3 538 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 ZNF573Q86YE8 665 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 RRNAD1Q96FB5 475 aaKnown RBP13.47□□□□□ -0.25
CDC42-203ENST00000400259 ZNF471Q9BX82 626 aaPredicted RBP13.47□□□□□ -0.25
CDC42-203ENST00000400259 PKIBQ9C010 78 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 NAA60Q9H7X0 242 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 DNAJB11Q9UBS4 358 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 PFDN2Q9UHV9 154 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 CEACAM4O75871 244 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 IL24Q13007 206 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 TUSC1Q2TAM9 212 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 GTF3AQ92664 365 aaKnown RBP13.47□□□□□ -0.25
CDC42-203ENST00000400259 BOD1Q96IK1 185 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 AQP10Q96PS8 301 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 HS3ST6Q96QI5 342 aa13.47□□□□□ -0.25
CDC42-203ENST00000400259 SYNGR1O43759 233 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 LILRA1O75019 489 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 HOXB5P09067 269 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 NAAAQ02083 359 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 LINC00518Q8N0U6 118 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 STPG2Q8N412 459 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 EIF4E3Q8N5X7 224 aaKnown RBP13.46□□□□□ -0.25
CDC42-203ENST00000400259 LRTM2Q8N967 370 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 BHLHE23Q8NDY6 225 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 TOMM40LQ969M1 308 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 RHOFQ9HBH0 211 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 Q9N2K0 584 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 TUBD1Q9UJT1 453 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 KCNIP3Q9Y2W7 256 aa13.46□□□□□ -0.25
CDC42-203ENST00000400259 A0A1B0GW55 424 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 F5H0A9 414 aaPredicted RBP13.46□□□□□ -0.26
CDC42-203ENST00000400259 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 RAB32Q13637 225 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 Q6ZT83 130 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 HSD17B13Q7Z5P4 300 aaPredicted RBP13.46□□□□□ -0.26
CDC42-203ENST00000400259 BATF2Q8N1L9 274 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 RTN4IP1Q8WWV3 396 aaPredicted RBP13.46□□□□□ -0.26
CDC42-203ENST00000400259 RSRP1Q9BUV0 290 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 SUCNR1Q9BXA5 334 aa13.46□□□□□ -0.26
CDC42-203ENST00000400259 MS4A7Q9GZW8 240 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms