RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 OR4S1Q8NGB4 309 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 OR10K1Q8NGX5 313 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 FAM216AQ8WUB2 273 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TNFAIP8L1Q8WVP5 186 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TMEM138Q9NPI0 162 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TNFRSF19Q9NS68 423 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 LSM2Q9Y333 95 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TPRKBQ9Y3C4 175 aa11.54□□□□□ -0.56
HLA-DQB1-202ENST00000399079 SH2D1BO14796 132 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 CDRT1O95170 752 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 BDKRB2P30411 391 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ZNF93P35789 620 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 VHLP40337 213 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 BLMHQ13867 455 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 IRF3Q14653 427 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 SPHARQ15513 63 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 GRK1Q15835 563 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 HCP5Q6MZN7 132 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 OR5D13Q8NGL4 314 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TAF15Q92804 592 aaKnown RBP eCLIP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 NR1H4Q96RI1 486 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ZNF184Q99676 751 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 UNKLQ9H9P5 680 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TRBV5-7A0A0A0MS05 114 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PIN1P1O15428 100 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RGS10O43665 173 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ALDOBP05062 364 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZNF44P15621 663 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TGFBR2P37173 567 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PTGFRP43088 359 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 OR3A1P47881 315 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ACTG1P63261 375 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 BDH1Q02338 343 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ACSM1Q08AH1 577 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 Q6P435 159 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TCF23Q7RTU1 214 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PXT1Q8NFP0 134 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CPNE2Q96FN4 548 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 DERL3Q96Q80 235 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CCDC90BQ9GZT6 254 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GLS2Q9UI32 602 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RAB26Q9ULW5 256 aa11.52□□□□□ -0.57
HLA-DQB1-202ENST00000399079 A0A0G2JK05 382 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 NPFFO15130 113 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GPX5O75715 221 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MAS1P04201 325 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CD1AP06126 327 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 DLX6P56179 175 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GUCA2AQ02747 115 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RSU1Q15404 277 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ELP2Q6IA86 826 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 Q6YL49 198 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TBC1D15Q8TC07 691 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SLC25A28Q96A46 364 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TMED9Q9BVK6 235 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PPA2Q9H2U2 334 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RHOFQ9HBH0 211 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 NOX4Q9NPH5 578 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ING3Q9NXR8 418 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CKLFQ9UBR5 152 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 TENM1Q9UKZ4 2725 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ING4Q9UNL4 249 aa11.51□□□□□ -0.57
HLA-DQB1-202ENST00000399079 A0A1W2PPH5 198 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MEIOCA2RUB1 952 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SLC33A1O00400 549 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MGST3O14880 152 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 HTR3BO95264 441 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MELTFP08582 738 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 FSTP19883 344 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 LMO1P25800 156 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 SAA4P35542 130 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MAP2K4P45985 399 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 MTNR1BP49286 362 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 UBE2E1P51965 193 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 AESQ08117 197 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 FAM27D1Q5T7N8 215 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 LIPKQ5VXJ0 399 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 NCR3LG1Q68D85 454 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 C17orf50Q8WW18 174 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GCDHQ92947 438 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZNF581Q9P0T4 197 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RRP15Q9Y3B9 282 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 FAM96BQ9Y3D0 163 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 CLDN34H7C241 214 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 HSPB6O14558 160 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 DEGS1O15121 323 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 RNASE1P07998 156 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 GLIPR1P48060 266 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 ACSM3Q53FZ2 586 aa11.5□□□□□ -0.57
HLA-DQB1-202ENST00000399079 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms