RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 TMEM108Q6UXF1 575 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 OR5C1Q8NGR4 320 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 STARD4Q96DR4 205 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 TP53RKQ96S44 253 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
ATL3-201ENST00000398868 DUSP21Q9H596 190 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
ATL3-201ENST00000398868 TCRBV5S2A0A599 114 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 FAM24AA6NFZ4 105 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 FRG2CA6NGY1 282 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 RHBDL1O75783 438 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 LYZP61626 148 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 DLK1P80370 383 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 RAB32Q13637 225 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 MRPL58Q14197 206 aaKnown RBP8.3□□□□□ -1.08
ATL3-201ENST00000398868 LINC01555Q8NAE3 123 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 SLC25A43Q8WUT9 341 aaPredicted RBP8.3□□□□□ -1.08
ATL3-201ENST00000398868 IGHV5-10-1A0A0J9YXX1 117 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 CXCL10P02778 98 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 COX6B1P14854 86 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 GPR3P46089 330 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 OR1B1Q8NGR6 318 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 OR6C3Q9NZP0 311 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 CXCL3P19876 107 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 ID4P47928 161 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 SKP2Q13309 424 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 MPV17LQ2QL34 196 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 SLC35D3Q5M8T2 416 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 UQCC3Q6UW78 93 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 OSR2Q8N2R0 312 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 MZB1Q8WU39 189 aa8.3□□□□□ -1.08
ATL3-201ENST00000398868 CIB3Q96Q77 187 aaPredicted RBP8.3□□□□□ -1.08
ATL3-201ENST00000398868 A0A087WUJ7 227 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ADH4P08319 380 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 NOVP48745 357 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 PNLIPRP2P54317 469 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 KLF3P57682 345 aaPredicted RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 PKIAP61925 76 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 PPP1R1AQ13522 171 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 RAB1BQ9H0U4 201 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ZMIZ1Q9ULJ6 1067 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 LRP12Q9Y561 859 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SELENOKQ9Y6D0 94 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 K7ERU9 68 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SMIM21Q3B7S5 101 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ZNF600Q6ZNG1 722 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 GVQW1Q8N7I0 195 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 MCHR2Q969V1 340 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 WFIKKN1Q96NZ8 548 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 CHD5Q8TDI0 1954 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 A0A1B0GV90 55 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 EPOPA6NHQ4 379 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 RGS13O14921 159 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 IL5P05113 134 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 EPHA8P29322 1005 aaPredicted RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 OTX1P32242 354 aaPredicted RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 NMUP48645 174 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 DYNLT3P51808 116 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 WDR73Q6P4I2 378 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SSX8Q7RTT4 187 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SMIM19Q96E16 107 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 TCFL5Q9UL49 500 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 CEP290O15078 2479 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 HMX2A2RU54 273 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 CRISP2P16562 243 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 MESP2Q0VG99 397 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 FDX2Q6P4F2 183 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ZNF707Q96C28 371 aaPredicted RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 IP6K3Q96PC2 410 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 UCN2Q96RP3 112 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 TMUB1Q9BVT8 246 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 RTN4RQ9BZR6 473 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 OPN3Q9H1Y3 402 aaPredicted RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 TMEM38AQ9H6F2 299 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SLC6A13Q9NSD5 602 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 MMP15P51511 669 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SLC35B1P78383 322 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ZNF260Q3ZCT1 412 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 CBLN3Q6UW01 205 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ST6GALNAC3Q8NDV1 305 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 OR1F12Q8NHA8 337 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 FKBP11Q9NYL4 201 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 GLI3P10071 1580 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 DOCK1Q14185 1865 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 F2RL2O00254 374 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 DHHO43323 396 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 FZD6O60353 706 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 ZNF137PP52743 207 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 C6orf201Q7Z4U5 140 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 MRGPREQ86SM8 312 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 TMEM251Q8N6I4 163 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 SLIRPQ9GZT3 109 aaKnown RBP8.29□□□□□ -1.08
ATL3-201ENST00000398868 RABAC1Q9UI14 185 aa8.29□□□□□ -1.08
ATL3-201ENST00000398868 DOCK3Q8IZD9 2030 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 CLDN34H7C241 214 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 CD96P40200 585 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 CCL8P80075 99 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms