RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FAM131AQ6UXB0 335 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 MRPL52Q86TS9 123 aaKnown RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 LINC00596Q86U02 117 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 C3orf22Q8N5N4 141 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 ZNF680Q8NEM1 530 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 OR4D6Q8NGJ1 314 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 OR1P1Q8NH06 330 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 NELFBQ8WX92 580 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 OR5P2Q8WZ92 322 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 CCDC124Q96CT7 223 aaKnown RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 PPP1R36Q96LQ0 422 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 CFAP53Q96M91 514 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 YPEL4Q96NS1 127 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 HBEGFQ99075 208 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 PITX2Q99697 317 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 SEC22CQ9BRL7 303 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 SUCNR1Q9BXA5 334 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 ANGPTL4Q9BY76 406 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 FADS3Q9Y5Q0 445 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 SCN4AP35499 1836 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 TMEM131Q92545 1883 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 BAZ1BQ9UIG0 1483 aaKnown RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 IGKV1OR2-108A0A075B7D4 117 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 A0A1B0GX12 115 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 IQCF5A8MTL0 148 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 C4orf51C9J302 202 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 TCF21O43680 179 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 PDCD6O75340 191 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 ATRNO75882 1429 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 CXorf1O96002 111 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 NRASP01111 189 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 HRASP01112 189 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 KRASP01116 189 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 GIMD1P0DJR0 217 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 TSPOP30536 169 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 RPA3P35244 121 aaPredicted RBP1.36□□□□□ -2.19
CD47-203ENST00000398258 MAGEA3P43357 314 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 BNIP2Q12982 314 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 BSXQ3C1V8 233 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 CLEC6AQ6EIG7 209 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 LAMTOR1Q6IAA8 161 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 ZNF773Q6PK81 442 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 GALNT10Q86SR1 603 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 COMTD1Q86VU5 262 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 SGPP2Q8IWX5 399 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 C17orf78Q8N4C9 275 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 ZIC4Q8N9L1 334 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 LINC00304Q8N9R0 145 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 OR8G5Q8NG78 346 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 OR2M3Q8NG83 312 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 OR4C13Q8NGP0 309 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 OR2AE1Q8NHA4 323 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 PHF10Q8WUB8 498 aaKnown RBP1.36□□□□□ -2.19
CD47-203ENST00000398258 ZMYND19Q96E35 227 aaPredicted RBP1.36□□□□□ -2.19
CD47-203ENST00000398258 FMC1Q96HJ9 113 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 PYURFQ96I23 114 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 ACBD6Q9BR61 282 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 SRRQ9GZT4 340 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 MFSD1Q9H3U5 465 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 POMKQ9H5K3 350 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 VSIRQ9H7M9 311 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 TMBIM4Q9HC24 238 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 OR2S2Q9NQN1 319 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 TAS2R1Q9NYW7 299 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 ZNF492Q9P255 531 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 SLC22A14Q9Y267 594 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 SNX24Q9Y343 169 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 SHANK1Q9Y566 2161 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 ZBED9Q6R2W3 1325 aa1.36□□□□□ -2.19
CD47-203ENST00000398258 NID2Q14112 1375 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 KIAA0232Q92628 1395 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 LOXHD1Q8IVV2 1947 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 PLXNB3Q9ULL4 1909 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 IGHV3-21A0A0B4J1V1 117 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 GOLGA8QA0A0J9YX86 632 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 HSBP1L1C9JCN9 74 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 TMEM250H0YL14 139 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 ISLRO14498 428 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 UBDO15205 165 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 SGCEO43556 437 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 LDOC1O95751 146 aaPredicted RBP1.35□□□□□ -2.19
CD47-203ENST00000398258 HLA-AP01891 365 aaKnown RBP1.35□□□□□ -2.19
CD47-203ENST00000398258 SLC35E2BP0CK96 405 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 SLC2A1P11166 492 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 M6PRP20645 277 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 PRTN3P24158 256 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 IL12BP29460 328 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 OR4D1Q15615 310 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 TRAM1Q15629 374 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 LDLRAD2Q5SZI1 272 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 FAM162BQ5T6X4 162 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 ZNF470Q6ECI4 717 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 FAM183BPQ6ZVS7 135 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 TMEM144Q7Z5S9 345 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 ZNF664Q8N3J9 261 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 SLC25A45Q8N413 288 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 OR8S1Q8NH09 359 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 CLHC1Q8NHS4 586 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 FAM45AQ8TCE6 357 aa1.35□□□□□ -2.19
CD47-203ENST00000398258 C22orf15Q8WYQ4 148 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms