RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PPA1Q15181 289 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 TAF9Q16594 264 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 CARFQ8N187 725 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 CYB561D1Q8N8Q1 229 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 ZFP62Q8NB50 900 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 OR2G3Q8NGZ4 309 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 LIME1Q9H400 295 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 PHF3Q92576 2039 aaKnown RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 RBFOX3A6NFN3 312 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 K7N7A8 449 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 EFNA2O43921 213 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF43P17038 809 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 MAS1LP35410 378 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 GUCA1AP43080 201 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 IL13RA2Q14627 380 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 LBHQ53QV2 105 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 ANKRD39Q53RE8 183 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF880Q6PDB4 577 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 SLC25A47Q6Q0C1 308 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 GPR137CQ8N3F9 429 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 OR1L3Q8NH93 324 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 SNIP1Q8TAD8 396 aaKnown RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 LYZL4Q96KX0 146 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 NECAP2Q9NVZ3 263 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 PIGLQ9Y2B2 252 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 TMEM131Q92545 1883 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 RPL36A-HNRNPH2H7BZ11 118 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 DRD1P21728 446 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 TUBG1P23258 451 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 OMGP23515 440 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF133P52736 654 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 TLE1Q04724 770 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 BTNL3Q6UXE8 466 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 MEX3BQ6ZN04 569 aaKnown RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 LIAT1Q6ZQX7 453 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 LGI3Q8N145 548 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 PRR18Q8N4B5 295 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 CNTRLQ7Z7A1 2325 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 PHF1O43189 567 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 TRAF3IP2O43734 574 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 ANGPTL7O43827 346 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 CA11O75493 328 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 AMBPP02760 352 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 MMP9P14780 707 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 SFTPDP35247 375 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 ALDH3B1P43353 468 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 SUMO3P55854 103 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 RSPO4Q2I0M5 234 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 DEFB133Q30KQ1 61 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 CRIP3Q6Q6R5 217 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF429Q86V71 674 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 DEFB123Q8N688 67 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 DEFB119Q8N690 84 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 HAS2Q92819 552 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 FAM210BQ96KR6 192 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 AK3Q9UIJ7 227 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 MTCH2Q9Y6C9 303 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 LRP4O75096 1905 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 ELOA3CA0A087WX78 387 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 FAM221AA4D161 298 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 FAM24AA6NFZ4 105 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 DHRS3O75911 302 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 CCR5P51681 352 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 MTCP1P56278 107 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 EWSR1Q01844 656 aaKnown RBP eCLIP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 HIKESHIQ53FT3 197 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 WDR25Q64LD2 544 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 SLC16A14Q7RTX9 510 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 CPEB2Q7Z5Q1 589 aaKnown RBP7.98□□□□□ -1.13
CAPN3-206ENST00000397163 C20orf196Q8IYI0 205 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 NECAP1Q8NC96 275 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 OR5R1Q8NH85 324 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 GPR87Q9BY21 358 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 SLC2A9Q9NRM0 540 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 GPR173Q9NS66 373 aa7.98□□□□□ -1.13
CAPN3-206ENST00000397163 CCDC163A0A0D9SF12 145 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 A0A1B0GW64 132 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF814B7Z6K7 855 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 CSNK1A1P48729 337 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 RND3P61587 244 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 ETFRF1Q6IPR1 90 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 TEX38Q6PEX7 206 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 SUMF1Q8NBK3 374 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 OR11L1Q8NGX0 322 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 OR14L1PQ8NHC6 308 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 M1APQ8TC57 530 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 PP6455Q8WZ26 134 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 DYRK2Q92630 601 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 Q96M66 194 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 SYT3Q9BQG1 590 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 SMDT1Q9H4I9 107 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 DECR2Q9NUI1 292 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 FOXD3Q9UJU5 478 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-206ENST00000397163 ATG2AQ2TAZ0 1938 aa7.97□□□□□ -1.13
CAPN3-206ENST00000397163 DLEU1O43261 78 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms