RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MICU1Q9BPX6 476 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 PRR13Q9NZ81 148 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 IL36RNQ9UBH0 155 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 CACNA1GO43497 2377 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 CRYM-AS1A6NIL9 109 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 ADAP1O75689 374 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 IL13RA2Q14627 380 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 ATXN7L3Q14CW9 347 aaPredicted RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 Q6ZPA2 131 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 Q6ZS49 121 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 Q6ZS92 163 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SLC51BQ86UW2 128 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 GSX2Q9BZM3 304 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 OR2J1Q9GZK6 312 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 OR51I2Q9H344 312 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 LIME1Q9H400 295 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SPACA1Q9HBV2 294 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 C1orf123Q9NWV4 160 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 MBD2Q9UBB5 411 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 PROCRQ9UNN8 238 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 AUP1Q9Y679 476 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 TEX13DA0A0J9YY54 714 aaPredicted RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 KANTRA0A1W2PQU2 76 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 RAC2P15153 192 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SELEP16581 610 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 PSMB6P28072 239 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 FXYD4P59646 89 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 UBA52P62987 128 aaKnown RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 FOXF2Q12947 444 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SRSF7Q16629 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
CBX3-202ENST00000396386 ABCA11PQ4W5N1 156 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 ACOT7LQ6ZUV0 252 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 OR1J1Q8NGS3 322 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 SLC25A40Q8TBP6 338 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 NEK7Q8TDX7 302 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 ADAT1Q9BUB4 502 aaKnown RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 WDR13Q9H1Z4 485 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 METTL8Q9H825 291 aaKnown RBP12.78□□□□□ -0.36
CBX3-202ENST00000396386 RHOFQ9HBH0 211 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 PLSCR4Q9NRQ2 329 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 SPTBN2O15020 2390 aa12.78□□□□□ -0.36
CBX3-202ENST00000396386 LRP5LA4QPB2 252 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 MBD3L4A6NDZ8 208 aaPredicted RBP12.77□□□□□ -0.37
CBX3-202ENST00000396386 MBD3L3A6NE82 208 aaPredicted RBP12.77□□□□□ -0.37
CBX3-202ENST00000396386 MBD3L5A6NJ08 208 aaPredicted RBP12.77□□□□□ -0.37
CBX3-202ENST00000396386 LEUTXA8MZ59 168 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 BCL2L11O43521 198 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 IGKV3-15P01624 115 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 FCGR2CP31995 323 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 ERVS71-1P61550 626 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 HERV-K104P61576 105 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 ESPL1Q14674 2120 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 FAM58AQ8N1B3 248 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 WDR31Q8NA23 367 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 MBD3L2Q8NHZ7 208 aaPredicted RBP12.77□□□□□ -0.37
CBX3-202ENST00000396386 MOB3AQ96BX8 217 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 PIK3IP1Q96FE7 263 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 ZNF488Q96MN9 340 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 DKK4Q9UBT3 224 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 KIF25Q9UIL4 384 aa12.77□□□□□ -0.37
CBX3-202ENST00000396386 RNF222A6NCQ9 220 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 IQCF6A8MYZ5 107 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 WDR1O75083 606 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 TNFSF13O75888 250 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 NAPSAO96009 420 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 UCP2P55851 309 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 PIGPP57054 158 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
CBX3-202ENST00000396386 C2orf50Q96LR7 162 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 Q9N2K0 584 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 AGFG2O95081 481 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 PDGFAP04085 211 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 SPINK2P20155 84 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 UCP3P55916 312 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 ESCO2Q56NI9 601 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 ALKAL2Q6UX46 152 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 UNQ6126/PRO20091Q6UXV3 157 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
CBX3-202ENST00000396386 SLC38A6Q8IZM9 456 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 POC1AQ8NBT0 407 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 PCNPQ8WW12 178 aaKnown RBP12.76□□□□□ -0.37
CBX3-202ENST00000396386 DCUN1D4Q92564 292 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 NAA60Q9H7X0 242 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 OBP2BQ9NPH6 170 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 POLDIP2Q9Y2S7 368 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
CBX3-202ENST00000396386 KIR2DS1A0A191URI9 304 aa12.75□□□□□ -0.37
CBX3-202ENST00000396386 HSPB6O14558 160 aa12.75□□□□□ -0.37
CBX3-202ENST00000396386 ZNF205O95201 554 aa12.75□□□□□ -0.37
CBX3-202ENST00000396386 SPDEFO95238 335 aa12.75□□□□□ -0.37
CBX3-202ENST00000396386 CRYABP02511 175 aaKnown RBP12.75□□□□□ -0.37
CBX3-202ENST00000396386 HOXB5P09067 269 aa12.75□□□□□ -0.37
CBX3-202ENST00000396386 PET100P0DJ07 73 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms