RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MTCH1Q9NZJ7 389 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 J3QW42 95 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 SCO1O75880 301 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 NAPSAO96009 420 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 TUSC1Q2TAM9 212 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 HIKESHIQ53FT3 197 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 GGNBP1Q5YKI7 109 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 TFAP2EQ6VUC0 442 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 LINC00596Q86U02 117 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 OR5L1Q8NGL2 311 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 RTN4IP1Q8WWV3 396 aaPredicted RBP14.4□□□□□ -0.1
NUP50-202ENST00000396096 GMPPAQ96IJ6 420 aaPredicted RBP14.4□□□□□ -0.1
NUP50-202ENST00000396096 HIST1H2AAQ96QV6 131 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 SLC5A7Q9GZV3 580 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 C12orf49Q9H741 205 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 TMEM100Q9NV29 134 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 FAM86C1Q9NVL1 165 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 GSKIPQ9P0R6 139 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 TMA7Q9Y2S6 64 aaKnown RBP14.4□□□□□ -0.1
NUP50-202ENST00000396096 WDFY4Q6ZS81 3184 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 OR5B21A6NL26 309 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 TRAPPC2LH3BP13 241 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 ZNHIT1O43257 154 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 MRPL24Q96A35 216 aaKnown RBP14.4□□□□□ -0.1
NUP50-202ENST00000396096 PLK3Q9H4B4 646 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 SLC2A9Q9NRM0 540 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 GLRX2Q9NS18 164 aa14.4□□□□□ -0.1
NUP50-202ENST00000396096 ZNF629Q9UEG4 869 aaPredicted RBP14.4□□□□□ -0.1
NUP50-202ENST00000396096 ANKRD30BLA7E2S9 258 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 TAAR5O14804 337 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 IGHG3P01860 377 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 MDP1Q86V88 176 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 GALNT11Q8NCW6 608 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 C17orf50Q8WW18 174 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 GTF3AQ92664 365 aaKnown RBP14.39□□□□□ -0.11
NUP50-202ENST00000396096 SYT3Q9BQG1 590 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 Q9N2K0 584 aa14.39□□□□□ -0.11
NUP50-202ENST00000396096 TEX46H3BTG2 121 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 LGALS8O00214 317 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 DEDDO75618 318 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 OR5AC1P0C628 307 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 FTH1P19P0C7X4 201 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 AADACP22760 399 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 FXYD4P59646 89 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 S100A10P60903 97 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 HERV-K104P61576 105 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 LIAT1Q6ZQX7 453 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 CCDC71LQ8N9Z2 235 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 PARD6AQ9NPB6 346 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 ASCL3Q9NQ33 180 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 H7C1Q1 480 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 ZNF205O95201 554 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 PPYP01298 95 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 HOXD4P09016 255 aaPredicted RBP14.38□□□□□ -0.11
NUP50-202ENST00000396096 HKR1P10072 659 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 IL24Q13007 206 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 ZNF585AQ6P3V2 769 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 IGFL2Q6UWQ7 119 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 TMPRSS7Q7RTY8 843 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 ZNF573Q86YE8 665 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 FAM185AQ8N0U4 392 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 STPG2Q8N412 459 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 HS3ST6Q96QI5 342 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 PKIBQ9C010 78 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 PIGMQ9H3S5 423 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 CLCF1Q9UBD9 225 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 GLS2Q9UI32 602 aa14.38□□□□□ -0.11
NUP50-202ENST00000396096 SYNGR1O43759 233 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 GLAP06280 429 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 GNG3P63215 75 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 EIF5AP63241 154 aaKnown RBP14.37□□□□□ -0.11
NUP50-202ENST00000396096 IL13RA2Q14627 380 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 UQCC3Q6UW78 93 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 CCDC36Q8IYA8 594 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 BATF2Q8N1L9 274 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 DEFB124Q8NES8 71 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 MSI2Q96DH6 328 aaKnown RBP14.37□□□□□ -0.11
NUP50-202ENST00000396096 RIMS4Q9H426 269 aaPredicted RBP14.37□□□□□ -0.11
NUP50-202ENST00000396096 SPACA1Q9HBV2 294 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 TAS2R3Q9NYW6 316 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 MED12LQ86YW9 2145 aa14.37□□□□□ -0.11
NUP50-202ENST00000396096 TRBV6-6A0A0A6YYG2 114 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 RAB19A4D1S5 217 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 ZNF14P17017 642 aaPredicted RBP14.36□□□□□ -0.11
NUP50-202ENST00000396096 SMCO1Q147U7 214 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 PHLDA2Q53GA4 152 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 FBXW12Q6X9E4 464 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 LGI3Q8N145 548 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 GLYATL2Q8WU03 294 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 RNF141Q8WVD5 230 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 PRRX2Q99811 253 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 RHOFQ9HBH0 211 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 LHX6Q9UPM6 363 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 SHANK1Q9Y566 2161 aa14.36□□□□□ -0.11
NUP50-202ENST00000396096 NKX2-8O15522 239 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 LILRA1O75019 489 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 KCNJ3P48549 501 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 RND3P61587 244 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 TBC1D28Q2M2D7 210 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms