RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LYRM1O43325 122 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 CSF1P09603 554 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 HPS1Q92902 700 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 C11orf54Q9H0W9 315 aaPredicted RBP17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 IFT22Q9H7X7 185 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 UBTD1Q9HAC8 227 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 DNAJB11Q9UBS4 358 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 AK3Q9UIJ7 227 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 NPTNQ9Y639 398 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 MCRIP1C9JLW8 97 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 OR2H2O95918 312 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 HAND1O96004 215 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 CYB5R3P00387 301 aaPredicted RBP17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 KNG1P01042 644 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 LHBP01229 141 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 MZT2BQ6NZ67 158 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 Q6P435 159 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 SUMF2Q8NBJ7 301 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 NEK7Q8TDX7 302 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 CMSS1Q9BQ75 279 aaKnown RBP17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 PLEKHA6Q9Y2H5 1048 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 PKDREJQ9NTG1 2253 aa17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 RAI1Q7Z5J4 1906 aaPredicted RBP17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 UBR5O95071 2799 aaPredicted RBP17.18■□□□□ 0.34
VCPKMT-202ENST00000395860 LRRC30A6NM36 301 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 CENPXA8MT69 81 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 J3QKU1 62 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 SIRPB1O00241 398 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 HSPB6O14558 160 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 PTTG1O95997 202 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 SOD3P08294 240 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 RCVRNP35243 200 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 CBX5P45973 191 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 DYRK1AQ13627 763 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 TRIM16LQ309B1 348 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 GVQW1Q8N7I0 195 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 DYRK2Q92630 601 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 RDH5Q92781 318 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 DOPEY1Q5JWR5 2465 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 TRAV24A0A0B4J272 114 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 CD8AP01732 235 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 DANCRP0C864 163 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 C11orf71Q6IPW1 123 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 FAM90A1Q86YD7 464 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 CHPT1Q8WUD6 406 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 OCSTAMPQ9BR26 566 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 DPCDQ9BVM2 203 aaPredicted RBP17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 NLKQ9UBE8 527 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 ABCA4P78363 2273 aa17.17■□□□□ 0.34
VCPKMT-202ENST00000395860 RFPL4AA6NLU0 287 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 RFPL4AL1F8VTS6 287 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 CEBPDP49716 269 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 TAS2R19P59542 299 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 RBM39Q14498 530 aaKnown RBP17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 DTX2Q86UW9 622 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 TGIF2LYQ8IUE0 185 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 CENPSQ8N2Z9 138 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 BPIFB2Q8N4F0 458 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 C7orf50Q9BRJ6 194 aaKnown RBP17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 HDHD3Q9BSH5 251 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 ZNF701Q9NV72 531 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 LAMP3Q9UQV4 416 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 WIPI2Q9Y4P8 454 aa17.16■□□□□ 0.34
VCPKMT-202ENST00000395860 IGHV3OR15-7A0A075B7D8 119 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 A1L4Q6 167 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 SLC33A1O00400 549 aaPredicted RBP17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 CLDN1O95832 211 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 HPXP02790 462 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 GLAP06280 429 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 CD80P33681 288 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 OXA1LQ15070 435 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 PAN3Q58A45 887 aaKnown RBP17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 FAM201AQ5SY85 155 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 SFRP4Q6FHJ7 346 aaPredicted RBP17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 GDPD3Q7L5L3 318 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 TMEM229BQ8NBD8 167 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 MINDY2Q8NBR6 621 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 OR5T2Q8NGG2 359 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 TRAF4Q9BUZ4 470 aaPredicted RBP17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 RAB1BQ9H0U4 201 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 HRASLSQ9HDD0 168 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 ZNF107Q9UII5 783 aaPredicted RBP17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 CLEC18AA5D8T8 446 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 OR2AT4A6NND4 320 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 AKAIN1P0CW23 69 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 RFX2P48378 723 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 CLEC18BQ6UXF7 455 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 NRARPQ7Z6K4 114 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 C1orf87Q8N0U7 546 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 CLEC18CQ8NCF0 446 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 OR4S1Q8NGB4 309 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 DEDD2Q8WXF8 326 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 CCL17Q92583 94 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 ST6GALNAC5Q9BVH7 336 aa17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 ZNF230Q9UIE0 474 aaPredicted RBP17.15■□□□□ 0.34
VCPKMT-202ENST00000395860 FLNCQ14315 2725 aa17.14■□□□□ 0.34
VCPKMT-202ENST00000395860 MYO18BQ8IUG5 2567 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 IGHV1-69-2A0A0G2JMI3 117 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 FAM221AA4D161 298 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms