RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 OIT3Q8WWZ8 545 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
SREBF1-205ENST00000395757 CD74P04233 296 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 LSM6P62312 80 aaKnown RBP12.53□□□□□ -0.4
SREBF1-205ENST00000395757 ALKBH6Q3KRA9 238 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 C2orf50Q96LR7 162 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 ANXA10Q9UJ72 324 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 SH3BGRL2Q9UJC5 107 aa12.53□□□□□ -0.4
SREBF1-205ENST00000395757 LDLRAD4O15165 306 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 FPR2P25090 351 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 SRSF3P84103 164 aaKnown RBP12.52□□□□□ -0.4
SREBF1-205ENST00000395757 SPEM2Q0P670 501 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 GNMTQ14749 295 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 RAB35Q15286 201 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 EMG1Q92979 244 aaKnown RBP12.52□□□□□ -0.4
SREBF1-205ENST00000395757 GPR35Q9HC97 309 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 PNRC2Q9NPJ4 139 aaKnown RBP12.52□□□□□ -0.4
SREBF1-205ENST00000395757 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 RNF150Q9ULK6 438 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 LHX6Q9UPM6 363 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 GTF3C1Q12789 2109 aa12.52□□□□□ -0.4
SREBF1-205ENST00000395757 A0A087WZY1 265 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 LYZL6O75951 148 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 DAOP14920 347 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 ZP3P21754 424 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 APLNRP35414 380 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 FHITP49789 147 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 LPCAT3Q6P1A2 487 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 RNF141Q8WVD5 230 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 EXTL1Q92935 676 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 MEGF10Q96KG7 1140 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 OR2H1Q9GZK4 316 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 RPS10P5Q9NQ39 176 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 FBXL17Q9UF56 701 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 LNP1A1A4G5 178 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 MFSD2BA6NFX1 497 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 MFNGO00587 321 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 ZXDAP98168 799 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 MPPED2Q15777 294 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 PSMF1Q92530 271 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 TMEM230Q96A57 120 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 MRGPRFQ96AM1 343 aa12.52□□□□□ -0.41
SREBF1-205ENST00000395757 RIMS4Q9H426 269 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-205ENST00000395757 SSSCA1O60232 199 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 NDUFB7P17568 137 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 BCL3P20749 454 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 PCBD1P61457 104 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 ACTBL2Q562R1 376 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 OR10AD1Q8NGE0 317 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 NKX6-2Q9C056 277 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-205ENST00000395757 FAM234AQ9H0X4 552 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 ALX4Q9H161 411 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-205ENST00000395757 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 LRP4O75096 1905 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 TK1P04183 234 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 NFYBP25208 207 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 TMEM182Q6ZP80 229 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-205ENST00000395757 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 WDR54Q9H977 334 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 STARD10Q9Y365 291 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 WDR1O75083 606 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 AADACP22760 399 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 HOXA4Q00056 320 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-205ENST00000395757 PRDX4Q13162 271 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 FAM27BQ5VT28 67 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 FADS6Q8N9I5 356 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 MRPS24Q96EL2 167 aaKnown RBP12.51□□□□□ -0.41
SREBF1-205ENST00000395757 SYT3Q9BQG1 590 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 RASL12Q9NYN1 266 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 PPP1R3CQ9UQK1 317 aa12.51□□□□□ -0.41
SREBF1-205ENST00000395757 TMEM33P57088 247 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 MRPS34P82930 218 aaKnown RBP12.5□□□□□ -0.41
SREBF1-205ENST00000395757 EIF5AL1Q6IS14 154 aaKnown RBP12.5□□□□□ -0.41
SREBF1-205ENST00000395757 M1APQ8TC57 530 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 RHOVQ96L33 236 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 AMDHD2Q9Y303 409 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 RFNGQ9Y644 331 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 ANKRD30BLA7E2S9 258 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 UBE2NP61088 152 aaKnown RBP12.5□□□□□ -0.41
SREBF1-205ENST00000395757 CLN3Q13286 438 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 MARS2Q96GW9 593 aaKnown RBP12.5□□□□□ -0.41
SREBF1-205ENST00000395757 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-205ENST00000395757 PRSS50Q9UI38 385 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 FAM24AA6NFZ4 105 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 SERPINA7P05543 415 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
SREBF1-205ENST00000395757 PROK2Q9HC23 129 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 OBP2BQ9NPH6 170 aa12.5□□□□□ -0.41
SREBF1-205ENST00000395757 MGAQ8IWI9 3026 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms