RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM221AA4D161 298 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 ZAR1LA6NP61 321 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 LEUTXA8MZ59 168 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 HBZP02008 142 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 LRRTM3Q86VH5 581 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 BATF2Q8N1L9 274 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 SLC48A1Q6P1K1 146 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 SPANXA1Q9NS26 97 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 ERV3-1Q14264 604 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 SMUG1Q53HV7 270 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 PAPPA-AS1Q5QFB9 102 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
USP49-203ENST00000394253 CDKN3Q16667 212 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 NIT1Q86X76 327 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 NEUROG1Q92886 237 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 C3orf85A0A1B0GTC6 90 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 A0A1B0GX78 115 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 A8MWL6 223 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 RAB33BQ9H082 229 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 WDR13Q9H1Z4 485 aa12.02□□□□□ -0.48
USP49-203ENST00000394253 ZBTB42B2RXF5 422 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 SLC17A2O00624 439 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 OR5A1Q8NGJ0 315 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 GPX5O75715 221 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 RNF224P0DH78 156 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 CKS2P33552 79 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 LGALSLQ3ZCW2 172 aaPredicted RBP12.02□□□□□ -0.49
USP49-203ENST00000394253 SLC52A3Q9NQ40 469 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 HYAL1Q12794 435 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 RBKSQ9H477 322 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 EMCNQ9ULC0 261 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 VSIG4Q9Y279 399 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
USP49-203ENST00000394253 H3BMH7 237 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 PCBP3P57721 371 aaKnown RBP12.02□□□□□ -0.49
USP49-203ENST00000394253 BCDIN3DQ7Z5W3 292 aaKnown RBP12.02□□□□□ -0.49
USP49-203ENST00000394253 OR8I2Q8N0Y5 310 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 NEURL2Q9BR09 285 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 HAPLN2Q9GZV7 340 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.49
USP49-203ENST00000394253 TOGARAM1Q9Y4F4 1720 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 GPX2P18283 190 aa12.02□□□□□ -0.49
USP49-203ENST00000394253 ZNF385CQ66K41 422 aaPredicted RBP12.02□□□□□ -0.49
USP49-203ENST00000394253 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 OR8G5Q8NG78 346 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 OXGR1Q96P68 337 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 VN1R1Q9GZP7 353 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 CXorf36Q9H7Y0 433 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 LEPROTL1O95214 131 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 DUSP8Q13202 625 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 PRSS54Q6PEW0 395 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 C20orf196Q8IYI0 205 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 HSPB9Q9BQS6 159 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 CXorf65A6NEN9 183 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 MT-CO3P00414 261 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 IL2RAP01589 272 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 FAHP16930 419 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 FAM71F2Q6NXP2 309 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 MRPL54Q6P161 138 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 NHLRC1Q6VVB1 395 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 H3BQ15 152 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 MOSPD3O75425 235 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 P2RY1P47900 373 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 FAM219AQ8IW50 185 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 ISOC2Q96AB3 205 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 MARVELD1Q9BSK0 173 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 PROCRQ9UNN8 238 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 M0R1B8 84 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 POLR2IP36954 125 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 FLYWCH2Q96CP2 140 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 FBXO4Q9UKT5 387 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 PATJQ8NI35 1801 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 SMAD6O43541 496 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 SOX4Q06945 474 aaPredicted RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 PIANPQ8IYJ0 282 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 LRRC75AQ8NAA5 344 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 RNF167Q9H6Y7 350 aa12.01□□□□□ -0.49
USP49-203ENST00000394253 MBNL1Q9NR56 388 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 DNAJB12Q9NXW2 375 aaKnown RBP12.01□□□□□ -0.49
USP49-203ENST00000394253 TMEM33P57088 247 aa12□□□□□ -0.49
USP49-203ENST00000394253 OR52N5Q8NH56 324 aa12□□□□□ -0.49
USP49-203ENST00000394253 MS4A8Q9BY19 250 aa12□□□□□ -0.49
USP49-203ENST00000394253 SS18L1O75177 396 aaPredicted RBP12□□□□□ -0.49
USP49-203ENST00000394253 HTN1P15515 57 aa12□□□□□ -0.49
USP49-203ENST00000394253 SAPCD1Q5SSQ6 148 aa12□□□□□ -0.49
USP49-203ENST00000394253 MYOZ1Q9NP98 299 aaPredicted RBP12□□□□□ -0.49
USP49-203ENST00000394253 PRKRAO75569 313 aaKnown RBP12□□□□□ -0.49
USP49-203ENST00000394253 AVPR2P30518 371 aa12□□□□□ -0.49
USP49-203ENST00000394253 GSG1Q2KHT4 349 aa12□□□□□ -0.49
USP49-203ENST00000394253 RGS7BPQ6MZT1 257 aaPredicted RBP12□□□□□ -0.49
USP49-203ENST00000394253 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
USP49-203ENST00000394253 MARCH3Q86UD3 253 aa12□□□□□ -0.49
USP49-203ENST00000394253 RBM45Q8IUH3 476 aaKnown RBP12□□□□□ -0.49
USP49-203ENST00000394253 LSM10Q969L4 123 aaKnown RBP12□□□□□ -0.49
USP49-203ENST00000394253 C16orf70Q9BSU1 422 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms