RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 CHST4Q8NCG5 386 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 ADAD2Q8NCV1 583 aaKnown RBP4.85□□□□□ -1.63
NPM1-203ENST00000393820 OR4D6Q8NGJ1 314 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 OR4K15Q8NH41 348 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 NUBPLQ8TB37 319 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 CASTOR1Q8WTX7 329 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 TMED6Q8WW62 240 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 FER1L6-AS2Q96M78 137 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 ZNF285Q96NJ3 590 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 MAP3K3Q99759 626 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 MICU1Q9BPX6 476 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 ZNF251Q9BRH9 671 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 SLC5A7Q9GZV3 580 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 SLC26A1Q9H2B4 701 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 KCNK15Q9H427 330 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 STARD5Q9NSY2 213 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 PISDQ9UG56 409 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 TIMM10BQ9Y5J6 103 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 NOTCH2Q04721 2471 aa4.85□□□□□ -1.63
NPM1-203ENST00000393820 SPTAN1Q13813 2472 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 LOC107986453A0A1B0GWG9 222 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 WIPF3A6NGB9 483 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 LINC00473A8K010 186 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 TO15178 435 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 HCRTR1O43613 425 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 EIF3GO75821 320 aaKnown RBP eCLIP4.84□□□□□ -1.63
NPM1-203ENST00000393820 CSN2P05814 226 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 S100A6P06703 90 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 LIPCP11150 499 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 CTLA4P16410 223 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 NDUFB7P17568 137 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 AGAP20933 346 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 S100PP25815 95 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 MAS1LP35410 378 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 PTGFRP43088 359 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 KCNJ3P48549 501 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 UCP2P55851 309 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 POLR2GP62487 172 aaKnown RBP eCLIP4.84□□□□□ -1.63
NPM1-203ENST00000393820 SMCO1Q147U7 214 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 ARL6IP1Q15041 203 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 PPA1Q15181 289 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 OR7A5Q15622 319 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 EIF2S3LQ2VIR3 472 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 DEFB133Q30KQ1 61 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 RTL6Q6ICC9 239 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 OR10K2Q6IF99 312 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 CLEC18BQ6UXF7 455 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 ANGPTL5Q86XS5 388 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 TMEM217Q8N7C4 229 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 GVQW1Q8N7I0 195 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 SLC26A10Q8NG04 563 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 OR51A2Q8NGJ7 313 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 KCNG3Q8TAE7 436 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 MARCH1Q8TCQ1 289 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 ST7LQ8TDW4 575 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 RNF133Q8WVZ7 376 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 EMG1Q92979 244 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 FGGYQ96C11 551 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 MALSU1Q96EH3 234 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 RRNAD1Q96FB5 475 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 ARL5BQ96KC2 179 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 CMSS1Q9BQ75 279 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 SULT4A1Q9BR01 284 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 LRRC61Q9BV99 259 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 CHRNA10Q9GZZ6 450 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 OR51M1Q9H341 326 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 HRH4Q9H3N8 390 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 SMDT1Q9H4I9 107 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 ZNF703Q9H7S9 590 aaPredicted RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 SEBOXQ9HB31 216 aaPredicted RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 TAF9BQ9HBM6 251 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 FAM60AQ9NP50 221 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 METTL1Q9UBP6 276 aaKnown RBP4.84□□□□□ -1.63
NPM1-203ENST00000393820 GHRLQ9UBU3 117 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 IL17BQ9UHF5 180 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 MMACHCQ9Y4U1 282 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 FLVCR1Q9Y5Y0 555 aa4.84□□□□□ -1.63
NPM1-203ENST00000393820 MYO9AB2RTY4 2548 aa4.84□□□□□ -1.64
NPM1-203ENST00000393820 RP1P56715 2156 aa4.84□□□□□ -1.64
NPM1-203ENST00000393820 DOCK9Q9BZ29 2069 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 LOC102723996A0A087X1L8 192 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 TMED7-TICAM2A0A0A6YYA0 188 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 C17orf105B2RV13 164 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 C11orf98E9PRG8 122 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 H3BSH0 61 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 SSX5O60225 188 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 TSPAN2O60636 221 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 CA11O75493 328 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 AHSA1O95433 338 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 FABP1P07148 127 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 ACAA1P09110 424 aaPredicted RBP4.83□□□□□ -1.64
NPM1-203ENST00000393820 H2BFMP0C1H6 154 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 SFTA3P0C7M3 94 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 ST6GAL1P15907 406 aa4.83□□□□□ -1.64
NPM1-203ENST00000393820 MUC1P15941 1255 aaPredicted RBP4.83□□□□□ -1.64
NPM1-203ENST00000393820 RCC1P18754 421 aaPredicted RBP4.83□□□□□ -1.64
NPM1-203ENST00000393820 DAP3P51398 398 aaKnown RBP4.83□□□□□ -1.64
NPM1-203ENST00000393820 SLC26A5P58743 744 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms