RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MNAT1P51948 309 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 C9orf152Q5JTZ5 239 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF329Q86UD4 541 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 FAM58AQ8N1B3 248 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 CANT1Q8WVQ1 401 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 BORCS8Q96FH0 119 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 CLN6Q9NWW5 311 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 PCDHGB5Q9Y5G0 923 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 A0A087X0M5 115 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 A0A1B0GX30 115 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF670-ZNF695F2Z2N8 137 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 SIRPB1O00241 398 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 GNGT2O14610 69 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 SYT7O43581 403 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 NHLRC4P0CG21 123 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-202ENST00000393773 CALCBP10092 127 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 SLC6A1P30531 599 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 OR3A4PP47883 348 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 CRISP1P54107 249 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 SNU13P55769 128 aaKnown RBP12.15□□□□□ -0.46
CHMP3-202ENST00000393773 DGCR2P98153 550 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 AADACL4Q5VUY2 407 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 MEPCEQ7L2J0 689 aaKnown RBP12.15□□□□□ -0.46
CHMP3-202ENST00000393773 CORO2AQ92828 525 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 LRGUKQ96M69 825 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 NOL4LQ96MY1 436 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-202ENST00000393773 PAPOLBQ9NRJ5 636 aaKnown RBP12.15□□□□□ -0.46
CHMP3-202ENST00000393773 TAS2R3Q9NYW6 316 aa12.15□□□□□ -0.46
CHMP3-202ENST00000393773 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.46
CHMP3-202ENST00000393773 TENM2Q9NT68 2774 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 IGKV1-9A0A0C4DH69 117 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 LOC107986453A0A1B0GWG9 222 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A18PA6NE21 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A16PA6NEW6 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A20PA6NIJ5 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A9PA6NNJ1 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A12PA8MX19 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A5PA8MXJ8 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 RPP14O95059 124 aaKnown RBP12.14□□□□□ -0.47
CHMP3-202ENST00000393773 OR2H2O95918 312 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A15PP0C7V4 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A13PP0C7W8 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A14PP0C7W9 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 FAM90A24PP0C7X0 464 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 PRKACAP17612 351 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 CEACAM3P40198 252 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 MYCNOSP40205 109 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 GLIPR1P48060 266 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 POU3F4P49335 361 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 CDC42P60953 191 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 ACTR3P61158 418 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 PTGES3Q15185 160 aaKnown RBP12.14□□□□□ -0.47
CHMP3-202ENST00000393773 NXNL2Q5VZ03 156 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 CCDC144NLQ6NUI1 221 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 KLHL30-AS1Q8NEE0 82 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 CREB3L1Q96BA8 519 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 CSMD3Q7Z407 3707 aa12.14□□□□□ -0.47
CHMP3-202ENST00000393773 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 A0A1W2PPI3 338 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 ODAMA1E959 279 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 AQP12BA6NM10 295 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 KRT8P05787 483 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 PTGFRP43088 359 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 EFNB1P98172 346 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 FAHD1Q6P587 224 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 AQP12AQ8IXF9 295 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 YIPF7Q8N8F6 280 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 CCDC54Q8NEL0 328 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 DNAAF1Q8NEP3 725 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 CHPT1Q8WUD6 406 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 COQ2Q96H96 371 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 COMMD4Q9H0A8 199 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 HMG20AQ9NP66 347 aa12.13□□□□□ -0.47
CHMP3-202ENST00000393773 EXOSC4Q9NPD3 245 aaKnown RBP12.13□□□□□ -0.47
CHMP3-202ENST00000393773 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 CSN2P05814 226 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 SNRNP70P08621 437 aaKnown RBP12.12□□□□□ -0.47
CHMP3-202ENST00000393773 LMO1P25800 156 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 MNDAP41218 407 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 RBP2P50120 134 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 LUMP51884 338 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-202ENST00000393773 AESQ08117 197 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
CHMP3-202ENST00000393773 C17orf58Q2M2W7 97 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 PRSS35Q8N3Z0 413 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 TCEANCQ8N8B7 351 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 OR56B4Q8NH76 319 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 PP6455Q8WZ26 134 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms