RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 C3AR1Q16581 482 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 TSPO2Q5TGU0 170 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 ZNF468Q5VIY5 522 aaPredicted RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 KCNE4Q8WWG9 221 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 RTN4IP1Q8WWV3 396 aaPredicted RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 PSMF1Q92530 271 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 FRZBQ92765 325 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 WDR54Q9H977 334 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 TRIOO75962 3097 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 ZNF407Q9C0G0 2248 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 TRA2AQ13595 282 aaKnown RBP eCLIP9.22□□□□□ -0.931e-6■■■■■ 43.4
CALD1-203ENST00000393118 RAB35Q15286 201 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 SPATA46Q5T0L3 261 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 NSUN5P2Q63ZY6 315 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 FAM185AQ8N0U4 392 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 ARL6IP6Q8N6S5 226 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 PHYHIPLQ96FC7 376 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 PECRQ9BY49 303 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 CDH20Q9HBT6 801 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 METTL1Q9UBP6 276 aaKnown RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 OR14J1Q9UGF5 321 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 LHX6Q9UPM6 363 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 CHCHD2Q9Y6H1 151 aaPredicted RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 A0A1W2PNV4 684 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 DFFBO76075 338 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 OR2A4O95047 310 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 SULT1A1P50225 295 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 OSR2Q8N2R0 312 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 ZNF319Q9P2F9 582 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 R4GN57 208 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 A0A1W2PPE3 182 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 SEC14L6B5MCN3 397 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 FPR2P25090 351 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 MRPL49Q13405 166 aaKnown RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 C1QL2Q7Z5L3 287 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 CMTM1Q8IZ96 169 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 OR5AP2Q8NGF4 316 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 OR10S1Q8NGN2 331 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 M1APQ8TC57 530 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 AQP3Q92482 292 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 C2orf50Q96LR7 162 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 PACRGQ96M98 296 aaPredicted RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 ALX4Q9H161 411 aaPredicted RBP9.22□□□□□ -0.93
CALD1-203ENST00000393118 XIRP2A4UGR9 3374 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 IGLV3-12A0A075B6K2 115 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 OR6C6A6NF89 314 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 TCF21O43680 179 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 SERPINE2P07093 398 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 FGF5P12034 268 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 COX6A1P12074 109 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 HNF4GQ14541 408 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 HAGHQ16775 308 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 SNAI3Q3KNW1 292 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 MIDNQ504T8 468 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 GPR157Q5UAW9 335 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 RNF144BQ7Z419 303 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 OR56B2PQ8NGI1 322 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 OR5B12Q96R08 314 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 TWSG1Q9GZX9 223 aa9.21□□□□□ -0.93
CALD1-203ENST00000393118 GEMIN2O14893 280 aaKnown RBP9.21□□□□□ -0.94
CALD1-203ENST00000393118 TNFSF15O95150 251 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 SFT2D2O95562 160 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 CRHP06850 196 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 CD46P15529 392 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 GPM6AP51674 278 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 MLF1P58340 268 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 TMEM217Q8N7C4 229 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 ZNF611Q8N823 705 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 UBALD1Q8TB05 177 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 PCNX3Q9H6A9 2034 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 CD37P11049 281 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 IGFBP3P17936 291 aaPredicted RBP9.21□□□□□ -0.94
CALD1-203ENST00000393118 HNF1AP20823 631 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 OR1C1Q15619 314 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 GUK1Q16774 197 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 PIGYQ3MUY2 71 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 LHFPL2Q6ZUX7 228 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 RTN4RL2Q86UN3 420 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 PTX4Q96A99 478 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 SPSB1Q96BD6 273 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 SNX22Q96L94 193 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 NIPSNAP3BQ9BS92 247 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 ELOVL1Q9BW60 279 aa9.21□□□□□ -0.94
CALD1-203ENST00000393118 A0A1W2PR80 420 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 HSD17B6O14756 317 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 HPNP05981 417 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 RPL12P30050 165 aaKnown RBP9.2□□□□□ -0.94
CALD1-203ENST00000393118 UBE2V2Q15819 145 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 A0A1B0GTI1 187 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 M0R143 59 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 EFSO43281 561 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 ASCL1P50553 236 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 OR51H1Q8NH63 302 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 RAB39BQ96DA2 213 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 ANGPTL4Q9BY76 406 aa9.2□□□□□ -0.94
CALD1-203ENST00000393118 MRPL13Q9BYD1 178 aaKnown RBP9.2□□□□□ -0.94
CALD1-203ENST00000393118 SRXN1Q9BYN0 137 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms