RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNF708P17019 499 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 IL13RA2Q14627 380 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 HLA-DRB5Q30154 266 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 PLPPR5Q32ZL2 321 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF776Q68DI1 518 aaPredicted RBP6.74□□□□□ -1.33
VTI1A-201ENST00000393077 Q6ZVH6 145 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 DOK4Q8TEW6 326 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF480Q8WV37 535 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ALG14Q96F25 216 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ATP6V0BQ99437 205 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 WNT10AQ9GZT5 417 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 PLEKHF2Q9H8W4 249 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 IL21Q9HBE4 155 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 KLHL13Q9P2N7 655 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SLC22A13Q9Y226 551 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ST3GAL6Q9Y274 331 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SIGLEC7Q9Y286 467 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 IGHV2OR16-5A0A0B4J2B6 119 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 C11orf98E9PRG8 122 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 DEDDO75618 318 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 CTSDP07339 412 aaPredicted RBP6.74□□□□□ -1.33
VTI1A-201ENST00000393077 HLA-BQ31612 363 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF506Q5JVG8 444 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 UNQ9370/PRO34162Q6UXP9 181 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 OR2L13Q8N349 312 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SLC22A24Q8N4F4 322 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 C20orf141Q9NUB4 165 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SERTAD4Q9NUC0 356 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 NAT8BQ9UHF3 227 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF737O75373 536 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SYNGR4O95473 234 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 MAS1LP35410 378 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 RAB9AP51151 201 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 PDX1P52945 283 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SRSF4Q08170 494 aaKnown RBP6.74□□□□□ -1.33
VTI1A-201ENST00000393077 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 Q56UQ5 140 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 FAM78AQ5JUQ0 283 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 OR4C11Q6IEV9 310 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 VASH2Q86V25 355 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 KMT5CQ86Y97 462 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 STXBP6Q8NFX7 210 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 OR5D14Q8NGL3 314 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 KCNG3Q8TAE7 436 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 TSSK2Q96PF2 358 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 HINT2Q9BX68 163 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ASCC3Q8N3C0 2202 aaKnown RBP6.74□□□□□ -1.33
VTI1A-201ENST00000393077 H7C1C5 153 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 NXPH3O95157 252 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM225BP0DP42 221 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 HLA-DOBP13765 273 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SOX8P57073 446 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 NANOS3P60323 173 aaKnown RBP6.74□□□□□ -1.33
VTI1A-201ENST00000393077 FFAR4Q5NUL3 377 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM225Q6GV28 225 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 OR52E1Q8NGJ3 308 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 MRPL24Q96A35 216 aaKnown RBP6.74□□□□□ -1.33
VTI1A-201ENST00000393077 FGGYQ96C11 551 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ZG16BQ96DA0 208 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ADOQ96SZ5 270 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 GPR35Q9HC97 309 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 PLEKHJ1Q9NW61 149 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 OR1A2Q9Y585 309 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 BRWD1Q9NSI6 2320 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 IGHV2-70DA0A0C4DH43 119 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ODAMA1E959 279 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SERTM1A2A2V5 107 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 DPRXA6NFQ7 191 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF891A8MT65 544 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SRP14P37108 136 aaKnown RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 UCP2P55851 309 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 RAB35Q15286 201 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ANKRD55Q3KP44 614 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 CCSMST1Q4G0I0 132 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 BMPERQ8N8U9 685 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 BHLHE23Q8NDY6 225 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 OR10AC1Q8NH08 325 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 OR5B3Q8NH48 314 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 NINJ1Q92982 152 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 KTI12Q96EK9 354 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF665Q9H7R5 613 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 GPR84Q9NQS5 396 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 TSPAN2O60636 221 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 DBHP09172 617 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 BLVRBP30043 206 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 CCL20P78556 96 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SHBQ15464 509 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SHHQ15465 462 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 ZXDCQ2QGD7 858 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 MRGPRGQ86SM5 289 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 H1FOOQ8IZA3 346 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM256Q8N2U0 113 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 POC1AQ8NBT0 407 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 NANOS1Q8WY41 292 aaKnown RBP6.73□□□□□ -1.33
VTI1A-201ENST00000393077 BANF2Q9H503 90 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 PDFQ9HBH1 243 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 SLC45A2Q9UMX9 530 aa6.73□□□□□ -1.33
VTI1A-201ENST00000393077 LOC102723971A0A1B0GUV8 181 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms