RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PPP1CBP62140 327 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 PHYHD1Q5SRE7 291 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 FAM78BQ5VT40 261 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 CPT1CQ8TCG5 803 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 ERGIC1Q969X5 290 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
RTF1-201ENST00000389629 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 AURKAIP1Q9NWT8 199 aaPredicted RBP12.55□□□□□ -0.4
RTF1-201ENST00000389629 UNC13CQ8NB66 2214 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 DEDDO75618 318 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 ROM1Q03395 351 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 EGR4Q05215 589 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 TGFBR3Q03167 851 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 PLAC9Q5JTB6 97 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 SLC2A8Q9NY64 477 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 MBPP02686 304 aaPredicted RBP12.54□□□□□ -0.4
RTF1-201ENST00000389629 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 CATR1Q13166 79 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 MRPL49Q13405 166 aaKnown RBP12.54□□□□□ -0.4
RTF1-201ENST00000389629 EXTL1Q92935 676 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 ADGRG7Q96K78 797 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 CACFD1Q9UGQ2 172 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 IGLV1-36A0A0B4J1U3 117 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 AQP7O14520 342 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 DHHO43323 396 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 PMCHP20382 165 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 PRSS50Q9UI38 385 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 SLC31A2O15432 143 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
RTF1-201ENST00000389629 CD27P26842 260 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 APLNRP35414 380 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 TPPP2P59282 170 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 PNRC1Q12796 327 aaPredicted RBP12.54□□□□□ -0.4
RTF1-201ENST00000389629 OR5I1Q13606 314 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 SLC10A1Q14973 349 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 C1orf100Q5SVJ3 147 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
RTF1-201ENST00000389629 REC114Q7Z4M0 266 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 SHISA5Q8N114 240 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 OR1L3Q8NH93 324 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 TIMP4Q99727 224 aa12.54□□□□□ -0.4
RTF1-201ENST00000389629 SPINK2P20155 84 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 COX5AP20674 150 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 VAX1Q5SQQ9 334 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 DHRS3O75911 302 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 B4GALT1P15291 398 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 FUT3P21217 361 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 GDF1P27539 372 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 CCR5P51681 352 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 LHFPL2Q6ZUX7 228 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 OR5AS1Q8N127 324 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 WFIKKN1Q96NZ8 548 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 GABRG3Q99928 467 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 ZDHHC8Q9ULC8 765 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 COLCA2A8K830 154 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 ZNF708P17019 499 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 FCARP24071 287 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 FOXL2P58012 376 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 Q6ZS52 159 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 CASP8AP2Q9UKL3 1982 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 MEX3AA1L020 520 aaKnown RBP12.53□□□□□ -0.4
RTF1-201ENST00000389629 RND3P61587 244 aa12.53□□□□□ -0.4
RTF1-201ENST00000389629 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
RTF1-201ENST00000389629 UTP23Q9BRU9 249 aaKnown RBP12.53□□□□□ -0.4
RTF1-201ENST00000389629 LILRA5A6NI73 299 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 APOA2P02652 100 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 HNRNPA3P51991 378 aaKnown RBP12.52□□□□□ -0.4
RTF1-201ENST00000389629 TAAR9Q96RI9 348 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 A0A1B0GTI1 187 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 DXOO77932 396 aaKnown RBP12.52□□□□□ -0.4
RTF1-201ENST00000389629 RPP30P78346 268 aaKnown RBP12.52□□□□□ -0.4
RTF1-201ENST00000389629 C9orf40Q8IXQ3 194 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 OR10G3Q8NGC4 313 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 DMRTA2Q96SC8 542 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 CALHM2Q9HA72 323 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 KIAA1456Q9P272 454 aa12.52□□□□□ -0.4
RTF1-201ENST00000389629 H0YIZ8 118 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 PTTG1IPP53801 180 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 SUMO3P55854 103 aaPredicted RBP12.52□□□□□ -0.41
RTF1-201ENST00000389629 ZXDAP98168 799 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 RNF126Q9BV68 326 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 CBLN4Q9NTU7 201 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 RPH3ALQ9UNE2 315 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 DNAJC13O75165 2243 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 DEGS1O15121 323 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 CTXN2P0C2S0 81 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 PTGER4P35408 488 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 TBC1D26Q86UD7 250 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 M1APQ8TC57 530 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 CACNG5Q9UF02 275 aa12.52□□□□□ -0.41
RTF1-201ENST00000389629 GOLT1BQ9Y3E0 138 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms